RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MEIOBQ8N635 442 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 BVESQ8NE79 360 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 PRAP1Q96NZ9 151 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 HCAR1Q9BXC0 346 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 HAO2Q9NYQ3 351 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ST6GALNAC2Q9UJ37 374 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 SLC7A7Q9UM01 511 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 NTNG1Q9Y2I2 539 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 CDHR4A6H8M9 788 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 HMSDA8MTL9 139 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 AIPO00170 330 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ERAL1O75616 437 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 RP2O75695 350 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 UCHL1P09936 223 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 MAT2AP31153 395 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 S100A11P31949 105 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 PSMA6P60900 246 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 NOGQ13253 232 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 HLXQ14774 488 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 SLC9A5Q14940 896 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 OLFML2AQ68BL7 652 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ESPNLQ6ZVH7 1005 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF296Q8WUU4 475 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ADGRL4Q9HBW9 690 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 SIDT1Q9NXL6 827 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 KLHL9Q9P2J3 617 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ARPC1BO15143 372 aaKnown RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 MID1O15344 667 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 OGG1O15527 345 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 SULT1B1O43704 296 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 CREBL2O60519 120 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 RGS11O94810 467 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 OR12D2P58182 307 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 FXYD6P3P58550 94 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 POU4F2Q12837 409 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 CCDC116Q8IYX3 515 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 NUP43Q8NFH3 380 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF671Q8TAW3 534 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 TFGQ92734 400 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 MRGPRX3Q96LB0 322 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 FBXO9Q9UK97 447 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-205ENST00000539661 HRH3Q9Y5N1 445 aa16.32■□□□□ 0.2
RAB40C-205ENST00000539661 A0A0B4J203 849 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 VEGFDO43915 354 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 RCBTB2O95199 551 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 CD1AP06126 327 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 PRG2P13727 222 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 CSNK2A2P19784 350 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 GPR1P46091 355 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 C9orf64Q5T6V5 341 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF626Q68DY1 528 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF793Q6ZN11 406 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 LINGO2Q7L985 606 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 CMTM4Q8IZR5 234 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 TTLQ8NG68 377 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 LGALS14Q8TCE9 139 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 SMPDL3BQ92485 455 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 CNRIP1Q96F85 164 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 DEFB118Q96PH6 123 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 TTYH1Q9H313 450 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 NOX3Q9HBY0 568 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF223Q9UK11 482 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF443Q9Y2A4 671 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 LRIT2A6NDA9 550 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 SUSD5O60279 629 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 KRT33AO76009 404 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 LPLP06858 475 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 PPP3CBP16298 524 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 TEAD1P28347 426 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 PYCR1P32322 319 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 RAD52P43351 418 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 SEC61A1P61619 476 aaKnown RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 MRPS10P82664 201 aaKnown RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 SLC25A25Q6KCM7 469 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 NUDT18Q6ZVK8 323 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 PARS2Q7L3T8 475 aaKnown RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 OR5J2Q8NH18 312 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 OR5K2Q8NHB8 316 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 PHYHIPQ92561 330 aa16.31■□□□□ 0.2
RAB40C-205ENST00000539661 CACYBPQ9HB71 228 aaKnown RBP16.31■□□□□ 0.2
RAB40C-205ENST00000539661 A0A0G2JN53 185 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 ANTXRLA6NF34 631 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 HIST1H2ABP04908 130 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 SLC2A5P22732 501 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 FOXK2Q01167 660 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 KRT33BQ14525 404 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 HEPHL1Q6MZM0 1159 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 RPTNQ6XPR3 784 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 HIST3H2AQ7L7L0 130 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 C11orf96Q7Z7L8 435 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 HIST1H2ACQ93077 130 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 SMIM19Q96E16 107 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 NUS1Q96E22 293 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 SEC22CQ9BRL7 303 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 ACTRT3Q9BYD9 372 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 DPH1Q9BZG8 443 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 CA10Q9NS85 328 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 SLC35A3Q9Y2D2 325 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms