RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 BOCQ9BWV1 1114 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 NKX6-2Q9C056 277 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SUSD2Q9UGT4 822 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 MEIS3P1A6NDR6 274 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 K7ERQ8 282 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SULT1C4O75897 302 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 GTDC1Q4AE62 458 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 LETMD1Q6P1Q0 360 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR7G3Q8NG95 312 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR4K15Q8NH41 348 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF300Q96RE9 604 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SORBS1Q9BX66 1292 aaKnown RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SPATA6Q9NWH7 488 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 GHRLQ9UBU3 117 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 HPGDSO60760 199 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 EGFP01133 1207 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 GABRR1P24046 479 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 GMPRP36959 345 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SULF2Q8IWU5 870 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF778Q96MU6 729 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 LRFN5Q96NI6 719 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 INTS14Q96SY0 518 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 TXNRD2Q9NNW7 524 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SDR39U1Q9NRG7 319 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 C5AR2Q9P296 337 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 COL14A1Q05707 1796 aaKnown RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 IFT172Q9UG01 1749 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 PIP5K1CO60331 668 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 DFFBO76075 338 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF888P0CJ79 500 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SFTPDP35247 375 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MC3RP41968 323 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SELPLGQ14242 412 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 AARDQ4LEZ3 155 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 PAGE3Q5JUK9 113 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 FAM180BQ6P0A1 224 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF808Q8N4W9 903 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF610Q8N9Z0 462 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ZFAND1Q8TCF1 268 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SLAMF9Q96A28 289 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SLC30A3Q99726 388 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 V9GY05 133 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 A0A1W2PPV4 95 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TMEM221A6NGB7 291 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MAN2B1O00754 1011 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ITGAMP11215 1152 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 CAMK2DQ13557 499 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 FAM199XQ6PEV8 388 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TSSK4Q6SA08 328 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 RHOXF1Q8NHV9 184 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 FBXO27Q8NI29 283 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ADAMTS16Q8TE57 1224 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MITD1Q8WV92 249 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ELP4Q96EB1 424 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NUDT16L1Q9BRJ7 211 aaKnown RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NICN1Q9BSH3 213 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ALOXE3Q9BYJ1 711 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 GPR62Q9BZJ7 368 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 DCAF13Q9NV06 445 aaKnown RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 FBXO7Q9Y3I1 522 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SPO11Q9Y5K1 396 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NUDT21O43809 227 aaKnown RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 FGF4P08620 206 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 VEGFCP49767 419 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 LANCL3Q6ZV70 420 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 GPR155Q7Z3F1 870 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SERPINA12Q8IW75 414 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TANKQ92844 425 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SLC17A9Q9BYT1 436 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 DMRT3Q9NQL9 472 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TSPAN11A1L157 253 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 RNF212BA8MTL3 300 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 GAPDHSO14556 408 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TOX4O94842 621 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MT-ND4P03905 459 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 PPP3CBP16298 524 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MS4A2Q01362 244 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MZT1Q08AG7 82 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TMEM244Q5VVB8 128 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 KIAA0907Q7Z7F0 614 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SERPINA11Q86U17 422 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 MFSD6LQ8IWD5 586 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 SKA3Q8IX90 412 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 HORMAD2Q8N7B1 307 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NOX3Q9HBY0 568 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 H3BML4 177 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 B4GAT1O43505 415 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 TGM5O43548 720 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 T-ENOLP0DO92 83 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 PSMB10P40306 273 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 OPCMLQ14982 345 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 COL19A1Q14993 1142 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 NAA40Q86UY6 237 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
COL4A6-208ENST00000538570 DNAJC5GQ8N7S2 189 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms