RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 ZNF559Q9BR84 538 aa12.31□□□□□ -0.44
CDC27-210ENST00000533415 TSSK6Q9BXA6 273 aa12.31□□□□□ -0.44
CDC27-210ENST00000533415 MRPS26Q9BYN8 205 aaKnown RBP12.31□□□□□ -0.44
CDC27-210ENST00000533415 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
CDC27-210ENST00000533415 ARMC7Q9H6L4 198 aa12.31□□□□□ -0.44
CDC27-210ENST00000533415 PCDHGA3Q9Y5H0 932 aa12.31□□□□□ -0.44
CDC27-210ENST00000533415 ATMQ13315 3056 aa12.31□□□□□ -0.44
CDC27-210ENST00000533415 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 ITGA10O75578 1167 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 DLGAP3O95886 979 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 ONECUT2O95948 504 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 CHAF1BQ13112 559 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 VASH2Q86V25 355 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 GNPDA2Q8TDQ7 276 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 SMAP2Q8WU79 429 aaPredicted RBP12.3□□□□□ -0.44
CDC27-210ENST00000533415 TNFRSF13CQ96RJ3 184 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 FBXL4Q9UKA2 621 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 IGKV1D-42A0A075B6H8 117 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 NSG1A0A0A6YYJ2 146 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 SOX30O94993 753 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 MT-ND2P03891 347 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 GABRB1P18505 474 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 TACR3P29371 465 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 BPHLQ86WA6 291 aaPredicted RBP12.3□□□□□ -0.44
CDC27-210ENST00000533415 C10orf53Q8N6V4 93 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 ZNF527Q8NB42 609 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 RHOXF1Q8NHV9 184 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 LIN37Q96GY3 246 aaPredicted RBP12.3□□□□□ -0.44
CDC27-210ENST00000533415 IMMP1LQ96LU5 166 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 WDR54Q9H977 334 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 TBC1D23Q9NUY8 699 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 FARSAQ9Y285 508 aaKnown RBP12.3□□□□□ -0.44
CDC27-210ENST00000533415 DOCK10Q96BY6 2186 aa12.3□□□□□ -0.44
CDC27-210ENST00000533415 FADS1O60427 444 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 PPM1BO75688 479 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 ZFAND5O76080 213 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 INMTO95050 263 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 STSP08842 583 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 IL11P20809 199 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 IFNA8P32881 189 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 GIPRP48546 466 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 NRG3P56975 720 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 COPZ1P61923 177 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 GABREP78334 506 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 TSPAN31Q12999 210 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 ILKQ13418 452 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 COL28A1Q2UY09 1125 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 SPARTQ8N0X7 666 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 FBLIM1Q8WUP2 373 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 HDAC2Q92769 488 aaKnown RBP12.29□□□□□ -0.44
CDC27-210ENST00000533415 MOGAT1Q96PD6 335 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 PSD2Q9BQI7 771 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 OR11A1Q9GZK7 315 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 TMEM185BQ9H7F4 350 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 KLRF1Q9NZS2 232 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 C19orf25Q9UFG5 118 aaPredicted RBP12.29□□□□□ -0.44
CDC27-210ENST00000533415 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 TO15178 435 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 KLF4O43474 513 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 CHP2O43745 196 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 RAB15P59190 212 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 ATP1A4Q13733 1029 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 SNAPC1Q16533 368 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 LYPD8Q6UX82 237 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 ZNF550Q7Z398 422 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 MDGA2Q7Z553 956 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 GRAMD2AQ8IUY3 354 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 CYB561A3Q8NBI2 242 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 SETD9Q8NE22 299 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 ELP5Q8TE02 316 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 KTI12Q96EK9 354 aaPredicted RBP12.29□□□□□ -0.44
CDC27-210ENST00000533415 LRFN5Q96NI6 719 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 MED31Q9Y3C7 131 aa12.29□□□□□ -0.44
CDC27-210ENST00000533415 UNC119BA6NIH7 251 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 DCAF7P61962 342 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 ZNF620Q6ZNG0 422 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 FAM71CQ8NEG0 241 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 TEX47Q8TBZ9 253 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 FANK1Q8TC84 345 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 GGHQ92820 318 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 NMD3Q96D46 503 aaKnown RBP12.28□□□□□ -0.44
CDC27-210ENST00000533415 HSPBAP1Q96EW2 488 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 HCAR1Q9BXC0 346 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 OR52D1Q9H346 318 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 FBXL2Q9UKC9 423 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 ADAM18Q9Y3Q7 739 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 SPTBN4Q9H254 2564 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 A0A0G2JMM0 328 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 A0A1W2PPB8 328 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 A0A1W2PRS3 328 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 OR6C76A6NM76 312 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 KIR3DP1A8MWS1 328 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 LCKP06239 509 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 CLUP10909 449 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 SPINK2P20155 84 aa12.28□□□□□ -0.44
CDC27-210ENST00000533415 RPS5P46782 204 aaKnown RBP12.28□□□□□ -0.44
CDC27-210ENST00000533415 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms