RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	FAM219B	Q5XKK7	198 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	ZCCHC12	Q6PEW1	402 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	SHQ1	Q6PI26	577 aa	Known RBP	10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	KLHL24	Q6TFL4	600 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	CBLN3	Q6UW01	205 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	DEF8	Q6ZN54	512 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	IKBIP	Q70UQ0	350 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	C17orf78	Q8N4C9	275 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	SLC16A11	Q8NCK7	471 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	GPR119	Q8TDV5	335 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	FAM216A	Q8WUB2	273 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	JADE3	Q92613	823 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	ZHX1-C8orf76	Q96EF9	292 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	CHMP6	Q96FZ7	201 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	MS4A4E	Q96PG1	132 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	ZNF382	Q96SR6	550 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	RBM4	Q9BWF3	364 aa	Known RBP	10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	ICAM5	Q9UMF0	924 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431	SAR1B	Q9Y6B6	198 aa		10.99	□□□□□ -0.65
DDX41-215	ENST00000512431		B9A039	149 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	SULT2B1	O00204	365 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	PDPK1	O15530	556 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	ENO1	P06733	434 aa	Known RBP	10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	TACSTD2	P09758	323 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	GIF	P27352	417 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	PHB	P35232	272 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	DIO1	P49895	249 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	HTR6	P50406	440 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	CDH15	P55291	814 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	PRPS1	P60891	318 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	CBFB	Q13951	182 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	TOMM34	Q15785	309 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	SPATA19	Q7Z5L4	167 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	GLCCI1	Q86VQ1	547 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	TMCO5A	Q8N6Q1	288 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	WDR31	Q8NA23	367 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	RFWD2	Q8NHY2	731 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	FAM76A	Q8TAV0	307 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	SNX18	Q96RF0	628 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	JMJD8	Q96S16	334 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	BTBD2	Q9BX70	525 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	SLC17A5	Q9NRA2	495 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	GRHL1	Q9NZI5	618 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	UPB1	Q9UBR1	384 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	MALT1	Q9UDY8	824 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	PCDHB10	Q9UN67	800 aa		10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	UTP11	Q9Y3A2	253 aa	Known RBP	10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	POLR3H	Q9Y535	204 aa	Predicted RBP	10.98	□□□□□ -0.65
DDX41-215	ENST00000512431	IGKV3D-15	A0A087WSY6	115 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	SERTM1	A2A2V5	107 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	VSTM5	A8MXK1	200 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431		B4DSR2	109 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	INHBA	P08476	426 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	DAO	P14920	347 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	DDX5	P17844	614 aa	Known RBP	10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	IL2RG	P31785	369 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	IDH3G	P51553	393 aa	Predicted RBP	10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	CCR4	P51679	360 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	PKNOX1	P55347	436 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	DEFA6	Q01524	100 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	QPRT	Q15274	297 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	ZSWIM7	Q19AV6	140 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	KLHL26	Q53HC5	615 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	SLC25A53	Q5H9E4	307 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	PRR31	Q5SQ13	230 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	ZNF678	Q5SXM1	525 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	TMPPE	Q6ZT21	453 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	PEG10	Q86TG7	708 aa	Known RBP	10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	MTDH	Q86UE4	582 aa	Known RBP	10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	ZNF614	Q8N883	585 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	OR5W2	Q8NH69	310 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	NEU4	Q8WWR8	484 aa	Predicted RBP	10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	SAP130	Q9H0E3	1048 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	ANKZF1	Q9H8Y5	726 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	GIN1	Q9NXP7	522 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	DCTN4	Q9UJW0	460 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	TIMM22	Q9Y584	194 aa		10.97	□□□□□ -0.65
DDX41-215	ENST00000512431	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431		A0A0G2JK05	382 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	ZNF264	O43296	627 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	OIP5	O43482	229 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	EIF4E2	O60573	245 aa	Known RBP	10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	LILRA1	O75019	489 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	RGS9	O75916	674 aa	Predicted RBP	10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	PDE5A	O76074	875 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	CRYAA	P02489	173 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	ITGA5	P08648	1049 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	TFPI	P10646	304 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	IFNGR1	P15260	489 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	LIMS1	P48059	325 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	PPOX	P50336	477 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	GUCY2D	Q02846	1103 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	TIGD2	Q4W5G0	525 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	UNC50	Q53HI1	259 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	C9orf135	Q5VTT2	229 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	ABLIM2	Q6H8Q1	611 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	NOXRED1	Q6NXP6	359 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	OR52E4	Q8NGH9	312 aa		10.96	□□□□□ -0.65
DDX41-215	ENST00000512431	PIGX	Q8TBF5	258 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms