RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	AGAP5	A6NIR3	686 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MSTN	O14793	375 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	NTN1	O95631	604 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	DBI	P07108	87 aa	Known RBP	12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	NUDT7	P0C024	238 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TFPT	P0C1Z6	253 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC7A1	P30825	629 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MAGEA8	P43361	318 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ATP4B	P51164	291 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CRISP3	P54108	245 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SELENBP1	Q13228	472 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GNA13	Q14344	377 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RGN	Q15493	299 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC25A53	Q5H9E4	307 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PEX5L	Q8IYB4	626 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC38A5	Q8WUX1	472 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ST8SIA1	Q92185	356 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	REXO5	Q96IC2	774 aa	Known RBP	12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SRXN1	Q9BYN0	137 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RAD21L1	Q9H4I0	556 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RABEP2	Q9H5N1	569 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TIGAR	Q9NQ88	270 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SERINC1	Q9NRX5	453 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CALML5	Q9NZT1	146 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PROCR	Q9UNN8	238 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TRIM33	Q9UPN9	1127 aa		12.67	□□□□□ -0.38
CCHCR1-222	ENST00000507459	DNAJA2	O60884	412 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CCNA2	P20248	432 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	KCNJ5	P48544	419 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	IDH2	P48735	452 aa	Known RBP	12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CTBP2	P56545	445 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PLAUR	Q03405	335 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FAM27E3	Q08E93	113 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MRPL2	Q5T653	305 aa	Known RBP	12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	C3orf33	Q6P1S2	294 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PLEKHM3	Q6ZWE6	761 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FAM214B	Q7L5A3	538 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	VRK2	Q86Y07	508 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CMIP	Q8IY22	773 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ZNF610	Q8N9Z0	462 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	OR52P1P	Q8NH57	321 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MAL2	Q969L2	176 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM19	Q96HH6	336 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	OR5B2	Q96R09	309 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	COQ10B	Q9H8M1	238 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC52A3	Q9NQ40	469 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	EXOSC3	Q9NQT5	275 aa	Known RBP	12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ACER3	Q9NUN7	267 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RLIM	Q9NVW2	624 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	THUMPD1	Q9NXG2	353 aa	Known RBP	12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SLC25A37	Q9NYZ2	338 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	EMC9	Q9Y3B6	208 aa		12.66	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CSMD1	Q96PZ7	3565 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	IGHV3-15	A0A0B4J1V0	119 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459		A0A1W2PP18	115 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ETV2	O00321	342 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	AP3D1	O14617	1153 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ADAM11	O75078	769 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	VIM	P08670	466 aa	Known RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TFPI	P10646	304 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	NID1	P14543	1247 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	HOXB9	P17482	250 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	RPS4Y1	P22090	263 aa	Known RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	IRX1	P78414	480 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SORD	Q00796	357 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GUCY1A3	Q02108	690 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GUSBP1	Q15486	140 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ZNF239	Q16600	458 aa	Known RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	EXOC3L2	Q2M3D2	409 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	LRIF1	Q5T3J3	769 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GTF2IRD2B	Q6EKJ0	949 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GTF2IRD2	Q86UP8	949 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	LSR	Q86X29	649 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	MSRB3	Q8IXL7	192 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FAM222B	Q8WU58	562 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	ABHD3	Q8WU67	409 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	STON2	Q8WXE9	905 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	PMM1	Q92871	262 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CPNE4	Q96A23	557 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	DNAJA3	Q96EY1	480 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	GPATCH1	Q9BRR8	931 aa	Known RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	SIKE1	Q9BRV8	207 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM120A	Q9BXJ8	343 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CACYBP	Q9HB71	228 aa	Known RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CTPS2	Q9NRF8	586 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	FGFR1OP2	Q9NVK5	253 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	TMEM45A	Q9NWC5	275 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	DNAJB12	Q9NXW2	375 aa	Known RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	VAPA	Q9P0L0	249 aa		12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.65	□□□□□ -0.38
CCHCR1-222	ENST00000507459	CSMD2	Q7Z408	3487 aa		12.64	□□□□□ -0.39
CCHCR1-222	ENST00000507459		A0A0G2JPF8	293 aa		12.64	□□□□□ -0.39
CCHCR1-222	ENST00000507459	HNRNPCL2	B2RXH8	293 aa		12.64	□□□□□ -0.39
CCHCR1-222	ENST00000507459	HNRNPCL3	B7ZW38	293 aa		12.64	□□□□□ -0.39
CCHCR1-222	ENST00000507459	C5orf58	C9J3I9	102 aa		12.64	□□□□□ -0.39
CCHCR1-222	ENST00000507459	HNRNPCL1	O60812	293 aa	Known RBP	12.64	□□□□□ -0.39
CCHCR1-222	ENST00000507459	SS18L1	O75177	396 aa	Predicted RBP	12.64	□□□□□ -0.39

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