RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MAGEA1P43355 309 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 CDH6P55285 790 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 PLP1P60201 277 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 VLDLRP98155 873 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ACY1Q03154 408 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 MERTKQ12866 999 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 SIX1Q15475 284 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCL14Q16627 93 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 PPP1R3AQ16821 1122 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TIGITQ495A1 244 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMEM52BQ4KMG9 183 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 EMBQ6PCB8 327 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMUB2Q71RG4 321 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 LRRC49Q8IUZ0 686 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCDC65Q8IXS2 484 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATP6V0D2Q8N8Y2 350 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 PRSS33Q8NF86 280 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR2T33Q8NG76 320 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR9A4Q8NGU2 314 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 NPRL2Q8WTW4 380 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TFB1MQ8WVM0 346 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TCTEX1D2Q8WW35 142 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC38A4Q969I6 547 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 PGLYRP2Q96PD5 576 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 IL4I1Q96RQ9 567 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCT8L2Q96SF2 557 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 NAT10Q9H0A0 1025 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ILKAPQ9H0C8 392 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 RHBGQ9H310 441 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 GLIPR2Q9H4G4 154 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ANKRD19PQ9H560 264 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 NARFLQ9H6Q4 476 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 SUDS3Q9H7L9 328 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 POPDC2Q9HBU9 364 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF160Q9HCG1 818 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 GCNT4Q9P109 453 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 PSMC3IPQ9P2W1 217 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 CACNG5Q9UF02 275 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 COPS3Q9UNS2 423 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 SAMD4AQ9UPU9 718 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 RNF24Q9Y225 148 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 PP2D1A8MPX8 630 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 B4DXG7 233 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 LSM1O15116 133 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 RGS16O15492 202 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 ARHGEF9O43307 516 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 IDH3BO43837 385 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 CXCL13O43927 109 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 PFKFB2O60825 505 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 POP4O95707 220 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 AMBPP02760 352 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 SERPINB2P05120 415 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 CD55P08174 381 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 HCKP08631 526 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 POLR2EP19388 210 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF10P21506 573 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 FDFT1P37268 417 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 ELK3P41970 407 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 TNNT2P45379 298 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 HNRNPA3P51991 378 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 EFNA3P52797 238 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 SPAG1Q07617 926 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 ST3GAL3Q11203 375 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 GK3PQ14409 553 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 MICBQ29980 383 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 MICAQ29983 383 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 TRIM16LQ309B1 348 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 DMRTC1Q5HYR2 192 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 FAM120AOSQ5T036 256 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 GSG1LQ6UXU4 331 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 EIF3MQ7L2H7 374 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 SERPINA9Q86WD7 417 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 GTPBP8Q8N3Z3 284 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 BPIFCQ8NFQ6 507 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR2L3Q8NG85 312 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 GTF3AQ92664 365 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC45A3Q96JT2 553 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 PRICKLE1Q96MT3 831 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 AGAP3Q96P47 875 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 TGS1Q96RS0 853 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 BPIFA3Q9BQP9 254 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 CHCHD5Q9BSY4 110 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 HCAR1Q9BXC0 346 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 GEMIN7Q9H840 131 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 NIPAL2Q9H841 368 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 NMRAL1Q9HBL8 299 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZNF446Q9NWS9 450 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 NUDT4Q9NZJ9 180 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC7A8Q9UHI5 535 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 PHF11Q9UIL8 331 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 CSDC2Q9Y534 153 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 N6AMT1Q9Y5N5 214 aa3.15□□□□□ -1.91
TRAPPC13-208ENST00000505553 A0A087X002 238 aa3.14□□□□□ -1.91
TRAPPC13-208ENST00000505553 TRBV11-1A0A0K0K1C0 115 aa3.14□□□□□ -1.91
TRAPPC13-208ENST00000505553 A0A1B0GTQ1 180 aa3.14□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR2AG2A6NM03 316 aa3.14□□□□□ -1.91
TRAPPC13-208ENST00000505553 FCN1O00602 326 aa3.14□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR10H3O60404 316 aa3.14□□□□□ -1.91
TRAPPC13-208ENST00000505553 DUS4LO95620 317 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms