RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 GPC6Q9Y625 555 aaPredicted RBP9.47□□□□□ -0.89
NELFE-213ENST00000494956 C16orf97H3BN30 126 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 AP3D1O14617 1153 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 DIAPH2O60879 1101 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 AK1P00568 194 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 CCNA2P20248 432 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 DNASE1P24855 282 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 LOXP28300 417 aaPredicted RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 ELK4P28324 431 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 ADH6P28332 368 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 SLC18A1P54219 525 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 EEF1A1P68104 462 aaKnown RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 MERTKQ12866 999 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 DPY19L1Q2PZI1 675 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 SLC25A53Q5H9E4 307 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 PDSS1Q5T2R2 415 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 ATAD3BQ5T9A4 648 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 AGBL2Q5U5Z8 902 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 EEF1A1P5Q5VTE0 462 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 ALKBH2Q6NS38 261 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 FCRLAQ7L513 359 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 LRRC34Q8IZ02 419 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 KIRREL3Q8IZU9 778 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 FAM71CQ8NEG0 241 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 PIWIL2Q8TC59 973 aaKnown RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 NINJ1Q92982 152 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 VPS33AQ96AX1 596 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 MRGPRX4Q96LA9 322 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 OR5B2Q96R09 309 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 ZNF300Q96RE9 604 aaPredicted RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 EBF4Q9BQW3 602 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 SLC39A3Q9BRY0 314 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 SAP130Q9H0E3 1048 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 SLC38A1Q9H2H9 487 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 HHATLQ9HCP6 504 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 CTPS2Q9NRF8 586 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 ELOVL5Q9NYP7 299 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 STOML1Q9UBI4 398 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 ING1Q9UK53 422 aaPredicted RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 USH1CQ9Y6N9 552 aa9.46□□□□□ -0.9
NELFE-213ENST00000494956 RAI1Q7Z5J4 1906 aaPredicted RBP9.46□□□□□ -0.9
NELFE-213ENST00000494956 RFXANKO14593 260 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 SMAD9O15198 467 aaKnown RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 DNAJA2O60884 412 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 SLC22A3O75751 556 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 SOX30O94993 753 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 PLAUP00749 431 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 RAF1P04049 648 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 ETFAP13804 333 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 CD53P19397 219 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 CRYGSP22914 178 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 MVDP53602 400 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 KCNJ10P78508 379 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 SELENBP1Q13228 472 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 KEAP1Q14145 624 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 PDCD4Q53EL6 469 aaKnown RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 RPS26P11Q5JNZ5 115 aaPredicted RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 PLEKHM3Q6ZWE6 761 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 CXorf67Q86X51 503 aaPredicted RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 ZNF563Q8TA94 476 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 RAB3IL1Q8TBN0 382 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 CPNE4Q96A23 557 aaPredicted RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 ARL5BQ96KC2 179 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 ZBTB18Q99592 522 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 FOXC2Q99958 501 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 OR11A1Q9GZK7 315 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 CXXC4Q9H2H0 198 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 PAQR5Q9NXK6 330 aaPredicted RBP9.45□□□□□ -0.9
NELFE-213ENST00000494956 PRSS50Q9UI38 385 aa9.45□□□□□ -0.9
NELFE-213ENST00000494956 ZNF814B7Z6K7 855 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 SLCO1B7G3V0H7 640 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 ETV2O00321 342 aaPredicted RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 UBDO15205 165 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 KLF4O43474 513 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 RAMP1O60894 148 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 GCM2O75603 506 aaPredicted RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 AGR2O95994 175 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 TFPIP10646 304 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 IDO1P14902 403 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 PGCP20142 388 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 SLC7A1P30825 629 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 DIO1P49895 249 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 POLR2JP52435 117 aaKnown RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 HPCAP84074 193 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 DEFB113Q30KQ7 82 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 TMEM201Q5SNT2 666 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 SLC2A7Q6PXP3 512 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 EPGNQ6UW88 154 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 TFAP2EQ6VUC0 442 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 ATG4DQ86TL0 474 aaPredicted RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 VRK2Q86Y07 508 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 WFDC8Q8IUA0 241 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 THOC1Q96FV9 657 aaKnown RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
NELFE-213ENST00000494956 PSD2Q9BQI7 771 aa9.44□□□□□ -0.9
NELFE-213ENST00000494956 CCDC106Q9BWC9 280 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms