RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 THRBP10828 461 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZNF26P17031 533 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 NME2P22392 152 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SLC1A3P43003 542 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 DNASE1L1P49184 302 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 IST1P53990 364 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 CDH12P55289 794 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 TMPRSS3P57727 454 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 B3GALT5-AS1P59052 145 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 CXADRP78310 365 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 RPP38P78345 283 aaKnown RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 SLC34A1Q06495 639 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 KCNAB2Q13303 367 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 DGCR6Q14129 220 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 RCN1Q15293 331 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SEC23BQ15437 767 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 GLYR1Q49A26 553 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 EIPR1Q53HC9 387 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 PRAMEF20Q5VT98 475 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 FBXW10Q5XX13 1052 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZNF770Q6IQ21 691 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 PODNL1Q6PEZ8 512 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZNF613Q6PF04 617 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ULK3Q6PHR2 472 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ARSKQ6UWY0 536 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 WDR88Q6ZMY6 472 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 Q6ZS92 163 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 GALNTL5Q7Z4T8 443 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 LSRQ86X29 649 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 NKAIN4Q8IVV8 208 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZADH2Q8N4Q0 377 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZNF614Q8N883 585 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZFP62Q8NB50 900 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 TOR1AIP2Q8NFQ8 470 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 OR2M7Q8NG81 312 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 OR1J4Q8NGS1 313 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 POC1BQ8TC44 478 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SLC7A13Q8TCU3 470 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ADAMTS16Q8TE57 1224 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SLC41A3Q96GZ6 507 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SH3YL1Q96HL8 342 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 FAM173AQ9BQD7 235 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZNF426Q9BUY5 554 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 OSBPL11Q9BXB4 747 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SEMA6AQ9H2E6 1030 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 UBQLN3Q9H347 655 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 YY1AP1Q9H869 796 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 RNPEPL1Q9HAU8 725 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 TMEM27Q9HBJ8 222 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZFP64Q9NPA5 681 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 KLHL1Q9NR64 748 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 C6orf203Q9P0P8 240 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 STOML1Q9UBI4 398 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 OSGIN1Q9UJX0 560 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ZMIZ1Q9ULJ6 1067 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SLC9A8Q9Y2E8 581 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 FAM32AQ9Y421 112 aaKnown RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 PCDHGB7Q9Y5F8 929 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 WIF1Q9Y5W5 379 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 NCOR2Q9Y618 2525 aa5.4□□□□□ -1.55
USP39-213ENST00000467885 CELSR3Q9NYQ7 3312 aa5.4□□□□□ -1.55
USP39-213ENST00000467885 ASPMQ8IZT6 3477 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 MED13Q9UHV7 2174 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 A0A087WUJ7 227 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 A0A0B4J2E0 115 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 A0A1B0GX12 115 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 SH3PXD2BA1X283 911 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 TRAPPC13A5PLN9 417 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 CPSF4LA6NMK7 179 aaKnown RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 MKRN2OSH3BPM6 223 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 KLRC4-KLRK1H3BQV0 150 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 TNFRSF11BO00300 401 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 DLGAP1O14490 977 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 MSTNO14793 375 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 CASQ2O14958 399 aaPredicted RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 GMFGO60234 142 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 PTP4A3O75365 173 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 DEAF1O75398 565 aaPredicted RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 SLC25A12O75746 678 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 OR5F1O95221 314 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 GADD45GO95257 159 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 H1F0P07305 194 aaKnown RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 PRKCAP17252 672 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 PGCP20142 388 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 IL11P20809 199 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 ADH6P28332 368 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 TACR3P29371 465 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 RRM2P31350 389 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 DNAJA1P31689 397 aaKnown RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 CASRP41180 1078 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 SLC6A8P48029 635 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 SUMO3P55854 103 aaPredicted RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 DSCR4P56555 118 aaPredicted RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 RGS8P57771 180 aaPredicted RBP5.39□□□□□ -1.55
USP39-213ENST00000467885 SMIM11AP58511 58 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 GPR85P60893 370 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 ARG2P78540 354 aa5.39□□□□□ -1.55
USP39-213ENST00000467885 EGR4Q05215 589 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms