RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MTHFD2LQ9H903 347 aaPredicted RBP11.59□□□□□ -0.55
COL5A1-206ENST00000465877 RNF122Q9H9V4 155 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 MRGBPQ9NV56 204 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 PAQR5Q9NXK6 330 aaPredicted RBP11.59□□□□□ -0.55
COL5A1-206ENST00000465877 CORO2BQ9UQ03 480 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF443Q9Y2A4 671 aaPredicted RBP11.59□□□□□ -0.55
COL5A1-206ENST00000465877 NDUFAF1Q9Y375 327 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 GMEB1Q9Y692 573 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 CACNA1DQ01668 2161 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 A0A0J9YW62 118 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 A0A1W2PNV4 684 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 AP3D1O14617 1153 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 ADAMDEC1O15204 470 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 CXCL13O43927 109 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 ADAM11O75078 769 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 TNFSF13O75888 250 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 THBS1P07996 1170 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 ARAFP10398 606 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 RYKP34925 604 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 SLC6A8P48029 635 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 AGFG1P52594 562 aaKnown RBP11.58□□□□□ -0.56
COL5A1-206ENST00000465877 SESN3P58005 492 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 FBXL19-AS1Q494R0 122 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 GCNT6Q5T4J0 391 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 PRAMEF8Q5VWM4 474 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 PRAMEF7Q5VXH5 474 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 HBMQ6B0K9 141 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 DLEU7Q6UYE1 221 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 PLEKHM3Q6ZWE6 761 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 GDF7Q7Z4P5 450 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 VRK2Q86Y07 508 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 OR52P1PQ8NH57 321 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF563Q8TA94 476 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 BBS10Q8TAM1 723 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 TSPEARQ8WU66 669 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 TMEM234Q8WY98 164 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 TRIM8Q9BZR9 551 aa11.58□□□□□ -0.56
COL5A1-206ENST00000465877 CACYBPQ9HB71 228 aaKnown RBP11.58□□□□□ -0.56
COL5A1-206ENST00000465877 MCTS1Q9ULC4 181 aaKnown RBP11.58□□□□□ -0.56
COL5A1-206ENST00000465877 A0A0G2JPF8 293 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 CDHR4A6H8M9 788 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 GJE1A6NN92 205 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 EVPLLA8MZ36 301 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 HNRNPCL2B2RXH8 293 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 HNRNPCL3B7ZW38 293 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 C5orf58C9J3I9 102 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 EFNA2O43921 213 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 HNRNPCL1O60812 293 aaKnown RBP11.57□□□□□ -0.56
COL5A1-206ENST00000465877 HNRNPCL4P0DMR1 293 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 PRF1P14222 555 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 SLC7A1P30825 629 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 UQCRC1P31930 480 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 DLX5P56178 289 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 MTPNP58546 118 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 EEF1A1P68104 462 aaKnown RBP11.57□□□□□ -0.56
COL5A1-206ENST00000465877 MERTKQ12866 999 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 NFYCQ13952 458 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 ZNF239Q16600 458 aaKnown RBP11.57□□□□□ -0.56
COL5A1-206ENST00000465877 PDSS1Q5T2R2 415 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 VWA1Q6PCB0 445 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 GRINAQ7Z429 371 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 MCEMP1Q8IX19 187 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 DMRTC2Q8IXT2 367 aaPredicted RBP11.57□□□□□ -0.56
COL5A1-206ENST00000465877 CNEP1R1Q8N9A8 125 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 NFKBIDQ8NI38 313 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 RNASE6Q93091 150 aaKnown RBP11.57□□□□□ -0.56
COL5A1-206ENST00000465877 LRRC46Q96FV0 321 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 CGREF1Q99674 301 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 TMEM38AQ9H6F2 299 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 BCL2L10Q9HD36 194 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 SAR1AQ9NR31 198 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 ACER3Q9NUN7 267 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 JKAMPQ9P055 326 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 PACSIN3Q9UKS6 424 aa11.57□□□□□ -0.56
COL5A1-206ENST00000465877 ANKRD17O75179 2603 aaKnown RBP11.57□□□□□ -0.56
COL5A1-206ENST00000465877 AQP8O94778 261 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 SYNGR4O95473 234 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 CRHP06850 196 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 PABPC4LP0CB38 370 aaKnown RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 UQCRBP14927 111 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 GPX2P18283 190 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 CPOXP36551 454 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 CPA2P48052 419 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 SIRPAP78324 504 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 EPS8Q12929 822 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 KLF10Q13118 480 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 SCARB2Q14108 478 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 SELPLGQ14242 412 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 LARS2Q15031 903 aaKnown RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 GUSBP1Q15486 140 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 MAPRE2Q15555 327 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 TRMT5Q32P41 509 aaKnown RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 RUNDC3AQ59EK9 446 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 REP15Q6BDI9 236 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 LUZP2Q86TE4 346 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 ATP6V1C2Q8NEY4 427 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 SLC25A43Q8WUT9 341 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 CPNE4Q96A23 557 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-206ENST00000465877 ANKRD27Q96NW4 1050 aa11.56□□□□□ -0.56
COL5A1-206ENST00000465877 CCDC106Q9BWC9 280 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms