RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 C3orf33Q6P1S2 294 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 ADAMTS15Q8TE58 950 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 ZNF75CPQ92670 426 aaPredicted RBP15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 FAM120BQ96EK7 910 aaKnown RBP15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 DNAJA3Q96EY1 480 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 STACQ99469 402 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 QRSL1Q9H0R6 528 aaKnown RBP15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 PIGUQ9H490 435 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 DUSP22Q9NRW4 184 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 SERINC1Q9NRX5 453 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 ACSS1Q9NUB1 689 aaPredicted RBP15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 EMC3Q9P0I2 261 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 FAF1Q9UNN5 650 aaPredicted RBP15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 PTGDR2Q9Y5Y4 395 aa15.86■□□□□ 0.13
CHCHD3-203ENST00000448878 SULT2B1O00204 365 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 ZNF264O43296 627 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 TFPIP10646 304 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 UROSP10746 265 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 APEHP13798 732 aaKnown RBP15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 PDLIM4P50479 330 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 ATP12AP54707 1039 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 TP53BP2Q13625 1128 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 CBFBQ13951 182 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 SPDYE7PQ495Y7 208 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 IQCCQ4KMZ1 466 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 TIGD2Q4W5G0 525 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 ZNF544Q6NX49 715 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 OR5W2Q8NH69 310 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 APH1AQ96BI3 265 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 CCT7Q99832 543 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 TRMOQ9BU70 441 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 FKRPQ9H9S5 495 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 TNFRSF12AQ9NP84 129 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 DTNAQ9Y4J8 743 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 TRAF6Q9Y4K3 522 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 SLC25A15Q9Y619 301 aa15.85■□□□□ 0.13
CHCHD3-203ENST00000448878 GOLGA8QA0A0J9YX86 632 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 GOLGA8OA6NCC3 632 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 GOLGA8NF8WBI6 632 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 H3BQF6 201 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 H6PDO95479 791 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 TGFAP01135 160 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 UBL4AP11441 157 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 SDC1P18827 310 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 DIO1P49895 249 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 RPL38P63173 70 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 CSNK2A1P68400 391 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 SQLEQ14534 574 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 GALNTL6Q49A17 601 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 C9orf135Q5VTT2 229 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 ZNF572Q7Z3I7 529 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 CCDC63Q8NA47 563 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 ZNF524Q96C55 264 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 MSI2Q96DH6 328 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 FBXO17Q96EF6 278 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 METTL2AQ96IZ6 378 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 PIMREGQ9BSJ6 248 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 THUMPD3Q9BV44 507 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 ACTRT3Q9BYD9 372 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 C12orf65Q9H3J6 166 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 EML4Q9HC35 981 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 DCDC2Q9UHG0 476 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 CCL27Q9Y4X3 112 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 KCNE3Q9Y6H6 103 aa15.84■□□□□ 0.13
CHCHD3-203ENST00000448878 TBX19O60806 448 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 MRPL33O75394 65 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 APOBEC3AP31941 199 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 FRKP42685 505 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 CCT3P49368 545 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 RUNX1T1Q06455 604 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 MERTKQ12866 999 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 MLC1Q15049 377 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 RFTN2Q52LD8 501 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 ZYG11AQ6WRX3 759 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 TMPPEQ6ZT21 453 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 FRMD7Q6ZUT3 714 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 ZHX1-C8orf76Q96EF9 292 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 ZNF764Q96H86 408 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 SIRT3Q9NTG7 399 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 TAS2R16Q9NYV7 291 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 TBK1Q9UHD2 729 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 FKBP7Q9Y680 259 aa15.83■□□□□ 0.12
CHCHD3-203ENST00000448878 EIF4E2O60573 245 aaKnown RBP15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 LINC00032P0C843 101 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 DDX5P17844 614 aaKnown RBP15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 PRPH2P23942 346 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 GCAP28676 217 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 NAA20P61599 178 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 ETF1P62495 437 aaKnown RBP15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 SLC25A53Q5H9E4 307 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 PDZK1Q5T2W1 519 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 OR7E24Q6IFN5 339 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 R3HCC1LQ7Z5L2 792 aaKnown RBP15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 MTDHQ86UE4 582 aaKnown RBP15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 FOXN4Q96NZ1 517 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 VRK1Q99986 396 aaPredicted RBP15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 PRR14Q9BWN1 585 aa15.82■□□□□ 0.12
CHCHD3-203ENST00000448878 UPB1Q9UBR1 384 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms