RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ATP6V1G1O75348 118 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 RNF8O76064 485 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 FGFR1OPO95684 399 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 OPN1LWP04000 364 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 IFNW1P05000 195 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 HNRNPCP07910 306 aaKnown RBP eCLIP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 RPSAP08865 295 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 UCHL3P15374 230 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 CDH2P19022 906 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 GGT1P19440 569 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 EDNRAP25101 427 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 AGTR1P30556 359 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 PTGDSP41222 190 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 PPOXP50336 477 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 EEFSECP57772 596 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 RPS15AP62244 130 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 DCTN2Q13561 401 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 KLF9Q13886 244 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 DPYSL3Q14195 570 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 GANABQ14697 944 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 RPS6KA2Q15349 733 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 TBCCQ15814 346 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 ADIPOQQ15848 244 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 DPCR1Q3MIW9 517 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 GPR33Q49SQ1 333 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 TIMM23BQ5SRD1 257 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 CCDC122Q5T0U0 273 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF626Q68DY1 528 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 KLHL17Q6TDP4 642 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 BRD3OSQ6XYD6 125 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 DGAT2L6Q6ZPD8 337 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 FAM47BQ8NA70 645 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 OR52E2Q8NGJ4 325 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 OR14A16Q8NHC5 309 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 NELFBQ8WX92 580 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 PPWD1Q96BP3 646 aaKnown RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 ISOC1Q96CN7 298 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 NODALQ96S42 347 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 CAPS2Q9BXY5 557 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 TSGA10Q9BZW7 698 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 TINAGL1Q9GZM7 467 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 STMN4Q9H169 189 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-205ENST00000447267 CCDC68Q9H2F9 335 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 KLHL31Q9H511 634 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 METTL7AQ9H8H3 244 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 FKRPQ9H9S5 495 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 EDA2RQ9HAV5 297 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 SERTAD4Q9NUC0 356 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 RMND1Q9NWS8 449 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 DCAF16Q9NXF7 216 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 FAM153AQ9UHL3 310 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 MRFAP1Q9Y605 127 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 hCG_2014768A0A024R1R8 64 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 A0A0G2JN53 185 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 LINC00854A0A1B0GVQ3 168 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 CTAGE15A4D2H0 777 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 C5orf60A6NFR6 353 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 OR5H1A6NKK0 313 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 B4DXG7 233 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 H3BML4 177 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 TRAPPC2LH3BP13 241 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 H7C0S8 307 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 NDUFS4O43181 175 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 CCNDBP1O95273 360 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 AGTP01019 485 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 AHSGP02765 367 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 TUBBP07437 444 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ERCC1P07992 297 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 MELTFP08582 738 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ENO3P13929 434 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 HRH2P25021 359 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 SRD5A2P31213 254 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 RFX3P48380 749 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF134P52741 427 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 HSD17B7P56937 341 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 TPM4P67936 248 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 EMX1Q04741 257 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ITIH4Q14624 930 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 RCN1Q15293 331 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 SMUG1Q53HV7 270 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 BOLA3Q53S33 107 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 THEMIS2Q5TEJ8 643 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ANKRD22Q5VYY1 191 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF470Q6ECI4 717 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 C9orf139Q6ZV77 190 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 LRRC70Q7Z2Q7 622 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 MAVSQ7Z434 540 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 CTAGE6Q86UF2 777 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 C1orf174Q8IYL3 243 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 DND1Q8IYX4 353 aaKnown RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 PARP8Q8N3A8 854 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 FAM110BQ8TC76 370 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 UTP15Q8TED0 518 aaKnown RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 DYRK2Q92630 601 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 ERP27Q96DN0 273 aa4.13□□□□□ -1.75
SDCBP-205ENST00000447267 DNAJC1Q96KC8 554 aaKnown RBP4.13□□□□□ -1.75
SDCBP-205ENST00000447267 CSF3RQ99062 836 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms