RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZFP90Q8TF47 636 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 TMEM234Q8WY98 164 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 PIGTQ969N2 578 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 NEURL3Q96EH8 262 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 DNAJA3Q96EY1 480 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 MARK4Q96L34 752 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 CCDC115Q96NT0 180 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 OR52E6Q96RD3 313 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 INPP5KQ9BT40 448 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 ACTR6Q9GZN1 396 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 ZNF350Q9GZX5 532 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 GSX1Q9H4S2 264 aaPredicted RBP8.28□□□□□ -1.08
NUP50-206ENST00000422489 MANSC1Q9H8J5 431 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 AIG1Q9NVV5 245 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 THAP1Q9NVV9 213 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 BEX4Q9NWD9 120 aaPredicted RBP8.28□□□□□ -1.08
NUP50-206ENST00000422489 BTNL2Q9UIR0 455 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 HAO1Q9UJM8 370 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 EXPH5Q8NEV8 1989 aa8.28□□□□□ -1.08
NUP50-206ENST00000422489 CCDC168Q8NDH2 2452 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 CSMD2Q7Z408 3487 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.27□□□□□ -1.09
NUP50-206ENST00000422489 CLDN24A6NM45 220 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 SLCO1B7G3V0H7 640 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 SULT2B1O00204 365 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 KLF4O43474 513 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 H6PDO95479 791 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 NR2F1P10589 423 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 IL32P24001 234 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 IL12AP29459 219 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 HOXC12P31275 282 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 CCKARP32238 428 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 CDKN2CP42773 168 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ANXA11P50995 505 aaKnown RBP8.27□□□□□ -1.09
NUP50-206ENST00000422489 SKP2Q13309 424 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 SYPL1Q16563 259 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 SLC25A53Q5H9E4 307 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 BEX5Q5H9J7 111 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 PLEKHM3Q6ZWE6 761 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.27□□□□□ -1.09
NUP50-206ENST00000422489 LRRC34Q8IZ02 419 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ZNF619Q8N2I2 560 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 SLC43A2Q8N370 569 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ARFGAP2Q8N6H7 521 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ANKFN1Q8N957 763 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 STEAP2Q8NFT2 490 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 PNPT1Q8TCS8 783 aaKnown RBP8.27□□□□□ -1.09
NUP50-206ENST00000422489 MIPOL1Q8TD10 442 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 RNF128Q8TEB7 428 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ST8SIA1Q92185 356 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 S100PBPQ96BU1 408 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 PLPPR2Q96GM1 343 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 CCL19Q99731 98 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 TACO1Q9BSH4 297 aaKnown RBP8.27□□□□□ -1.09
NUP50-206ENST00000422489 HDHD5Q9BXW7 423 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 COQ10BQ9H8M1 238 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 CTPS2Q9NRF8 586 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 POLE3Q9NRF9 147 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ACER3Q9NUN7 267 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 KLHL13Q9P2N7 655 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 SLC35A3Q9Y2D2 325 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 GPR45Q9Y5Y3 372 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 ARHGAP21Q5T5U3 1957 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 FREM3P0C091 2139 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 MED12Q93074 2177 aa8.27□□□□□ -1.09
NUP50-206ENST00000422489 HIVEP1P15822 2718 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 TEP1Q99973 2627 aaKnown RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 PRAMEF27A3QJZ7 478 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 HMGN4O00479 90 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 RFXANKO14593 260 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 KIAA0513O60268 411 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 SNNO75324 88 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 BCAS1O75363 584 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 SLC22A3O75751 556 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 ANP32DO95626 131 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 KRT75O95678 551 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 PLAUP00749 431 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 PGRP06401 933 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 ADSLP30566 484 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 PGM1P36871 562 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 APOBEC1P41238 236 aaKnown RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 IDH2P48735 452 aaKnown RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 DIO1P49895 249 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 OR2B6P58173 313 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 CSNK2A1P68400 391 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 KCNJ10P78508 379 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 SLC9B1Q4ZJI4 515 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 SFRP5Q5T4F7 317 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 SHEQ5VZ18 495 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 OGFOD2Q6N063 350 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 C3orf33Q6P1S2 294 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 FRRS1Q6ZNA5 592 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 ZNF704Q6ZNC4 412 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 TMPPEQ6ZT21 453 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 ZNF100Q8IYN0 542 aa8.26□□□□□ -1.09
NUP50-206ENST00000422489 CNOT9Q92600 299 aaKnown RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 KISS1RQ969F8 398 aaPredicted RBP8.26□□□□□ -1.09
NUP50-206ENST00000422489 PERPQ96FX8 193 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms