RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ATP1B3P54709 279 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 GSCP56915 257 aaPredicted RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 SLC35A1P78382 337 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF252P-AS1Q0IIN9 211 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 NADK2Q4G0N4 442 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 AGAP7PQ5VUJ5 663 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 OR56B2PQ8NGI1 322 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 AGAP4Q96P64 663 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 MT-CO2P00403 227 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 AMY2AP04746 511 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 OSMP13725 252 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ADPRHP54922 357 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 TNFRSF17Q02223 184 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 BAIAP2L2Q6UXY1 529 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 OR9Q2Q8NGE9 314 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF431Q8TF32 576 aaPredicted RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 INTS6Q9UL03 887 aaKnown RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 LRRC30A6NM36 301 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ALOX12BO75342 701 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 IFNA1P01562 189 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 PIGFQ07326 219 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 STEAP3Q658P3 488 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 TMEM64Q6YI46 380 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 GPR148Q8TDV2 347 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ASB11Q8WXH4 323 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 HDAC2Q92769 488 aaKnown RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 C12orf43Q96C57 262 aaKnown RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 TIMD4Q96H15 378 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ALG8Q9BVK2 526 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 PCDHGA1Q9Y5H4 931 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 SLITRK5O94991 958 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 EIF2DP41214 584 aaKnown RBP13.9□□□□□ -0.18
LRRK1-201ENST00000388948 C9orf50Q5SZB4 431 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 FAM57BQ71RH2 274 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 BTAF1O14981 1849 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 TRAV18A0A075B6X5 111 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ZCWPW2A0A1B0GU75 182 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 SURF4O15260 269 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 SELENOWP63302 87 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 SLX4IPQ5VYV7 408 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 MISPQ8IVT2 679 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 NETO1Q8TDF5 533 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 CREB3L1Q96BA8 519 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 TUBA1CQ9BQE3 449 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 ZDHHC5Q9C0B5 715 aa13.9□□□□□ -0.18
LRRK1-201ENST00000388948 SNAPC5O75971 98 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 ITGB2P05107 769 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 RBMS3Q6XE24 437 aaKnown RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 OR1S1Q8NH92 325 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SLC37A2Q8TED4 501 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 ACPTQ9BZG2 426 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 NMNAT1Q9HAN9 279 aaPredicted RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 HIF1ANQ9NWT6 349 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SLC6A5Q9Y345 797 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 STK17BO94768 372 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SDC1P18827 310 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SLC1A3P43003 542 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 ACTBP60709 375 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 ACTG1P63261 375 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 OR5T1Q8NG75 326 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 COL16A1Q07092 1604 aaPredicted RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 PCDH17O14917 1159 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 MSR1P21757 451 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 CLEC14AQ86T13 490 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 DEFB127Q9H1M4 99 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SYNPO2LQ9H987 977 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SLC6A20Q9NP91 592 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 F5H0A9 414 aaPredicted RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 ABHD16AO95870 558 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SERPINA2P20848 420 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 MSI2Q96DH6 328 aaKnown RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 C2CD4DB7Z1M9 353 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 FAM189A1O60320 539 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 NKAIN1Q4KMZ8 207 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 PXKQ7Z7A4 578 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 Q8N402 240 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 PDXPQ96GD0 296 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 LOC285095A0A1B0GVY8 99 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 RASAL1O95294 804 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 F13BP05160 661 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 GGT1P19440 569 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 PCGF2P35227 344 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 RAD52P43351 418 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 SF3A2Q15428 464 aaKnown RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 OR1Q1Q15612 314 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 GTDC1Q4AE62 458 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 CCDC58Q4VC31 144 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 MTFR2Q6P444 385 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 GSG1LQ6UXU4 331 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 MEX3BQ6ZN04 569 aaKnown RBP13.89□□□□□ -0.19
LRRK1-201ENST00000388948 CYS1Q717R9 158 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 GCM1Q9NP62 436 aa13.89□□□□□ -0.19
LRRK1-201ENST00000388948 H0YAE9 185 aa13.88□□□□□ -0.19
LRRK1-201ENST00000388948 PTH2RP49190 550 aa13.88□□□□□ -0.19
LRRK1-201ENST00000388948 KCNJ10P78508 379 aa13.88□□□□□ -0.19
LRRK1-201ENST00000388948 KANSL1Q7Z3B3 1105 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms