RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 OR9A4Q8NGU2 314 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 CNOT9Q92600 299 aaKnown RBP16.68■□□□□ 0.26
CD40-201ENST00000372276 PTP4A1Q93096 173 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 PPP1R3EQ9H7J1 279 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 ATP13A2Q9NQ11 1180 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 PRTFDC1Q9NRG1 225 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 COMMD3Q9UBI1 195 aa16.68■□□□□ 0.26
CD40-201ENST00000372276 NPIPB9F8W1W9 429 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 TRIM3O75382 744 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 NDUFB2O95178 105 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 SLC2A2P11168 524 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 SLC2A5P22732 501 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 MYL9P24844 172 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 NOS3P29474 1203 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 DDOSTP39656 456 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 ACTA2P62736 377 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 ACTG2P63267 376 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.67■□□□□ 0.26
CD40-201ENST00000372276 HBMQ6B0K9 141 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 GKN2Q86XP6 184 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 SDR16C5Q8N3Y7 309 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 CELF2-AS1Q8N7Q2 184 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 OR7G1Q8NGA0 311 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 OR10H4Q8NGA5 316 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 OR13C2Q8NGS9 318 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 KISS1RQ969F8 398 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 ZNF285Q96NJ3 590 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 CTRCQ99895 268 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 TTYH2Q9BSA4 534 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.67■□□□□ 0.26
CD40-201ENST00000372276 MIR1-1HGQ9H1L0 117 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 TCEAL2Q9H3H9 227 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 MEPEQ9NQ76 525 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 PLCL2Q9UPR0 1127 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 FAM183AA6NL82 134 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 TMEM127O75204 238 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 POU3F3P20264 500 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 AZGP1P25311 298 aaKnown RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 LTBRP36941 435 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 TALDO1P37837 337 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 CD79BP40259 229 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 ZMAT1Q5H9K5 638 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 CNIH2Q6PI25 160 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 TMEM91Q6ZNR0 172 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 GATAD2AQ86YP4 633 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 SLITRK4Q8IW52 837 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 SYS1Q8N2H4 156 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 ZFP41Q8N8Y5 198 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 SYT14Q8NB59 555 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 ENKURQ8TC29 256 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 SGTBQ96EQ0 304 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 GAS2L1Q99501 681 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 OR2B2Q9GZK3 357 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 FLRT3Q9NZU0 649 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 RABL2AQ9UBK7 228 aaPredicted RBP16.67■□□□□ 0.26
CD40-201ENST00000372276 IL20RAQ9UHF4 553 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 ICAM5Q9UMF0 924 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 RABL2BQ9UNT1 228 aa16.67■□□□□ 0.26
CD40-201ENST00000372276 MYO9BQ13459 2157 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 NPIPA5A0A0B4J1W7 369 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 CHURC1-FNTBB4DL54 471 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 NPIPA7E9PJI5 369 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 H0YIG0 161 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 OR2T7P0C7T2 308 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 NPIPA8P0DM63 369 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 LCN1P31025 176 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 ADH7P40394 386 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 NRG3P56975 720 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 FUT7Q11130 342 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 COL19A1Q14993 1142 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 QPRTQ15274 297 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 SLC35D3Q5M8T2 416 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 DPY19L2P2Q6ZN68 376 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 SYT13Q7L8C5 426 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 LRRC28Q86X40 367 aaPredicted RBP16.66■□□□□ 0.26
CD40-201ENST00000372276 Q8N402 240 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 OR2T27Q8NH04 317 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 GRHL3Q8TE85 626 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 PHYHIPQ92561 330 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 FRMD6Q96NE9 622 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 SNX18Q96RF0 628 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 MFRPQ9BY79 579 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 NDEL1Q9GZM8 345 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 PCED1AQ9H1Q7 454 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 FAM60AQ9NP50 221 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 CYP8B1Q9UNU6 501 aa16.66■□□□□ 0.26
CD40-201ENST00000372276 MEIOCA2RUB1 952 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 ANKRD61A6NGH8 418 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 TYRP1P17643 537 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 HLA-DMAP28067 261 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 CAPZBP47756 277 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 TGM4P49221 684 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 INPP1P49441 399 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 HSF2Q03933 536 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 FZD5Q13467 585 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 GGTLC2Q14390 218 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 SF3A2Q15428 464 aaKnown RBP16.65■□□□□ 0.26
CD40-201ENST00000372276 VASNQ6EMK4 673 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 THSD4Q6ZMP0 1018 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms