RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CHRM4P08173 479 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 UBTFL6P0CB48 400 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-202ENST00000340647 DNASE1P24855 282 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 EXOC3L2Q2M3D2 409 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 DEFB113Q30KQ7 82 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 TIGD2Q4W5G0 525 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 C16orf62Q7Z3J2 963 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 TUSC5Q8IXB3 177 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 ZNF619Q8N2I2 560 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 ATP6V1C2Q8NEY4 427 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 TOR1AIP2Q8NFQ8 470 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 ZNF75CPQ92670 426 aaPredicted RBP15.18■□□□□ 0.02
BRCC3-202ENST00000340647 SLC39A3Q9BRY0 314 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 KLHL4Q9C0H6 718 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 PCDHGB4Q9UN71 923 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 WDR45Q9Y484 360 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 CADP27708 2225 aa15.18■□□□□ 0.02
BRCC3-202ENST00000340647 SYNGR4O95473 234 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 CSTAP01040 98 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 RPS4Y1P22090 263 aaKnown RBP15.17■□□□□ 0.02
BRCC3-202ENST00000340647 ME2P23368 584 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 FOXD4Q12950 439 aaPredicted RBP15.17■□□□□ 0.02
BRCC3-202ENST00000340647 SELENBP1Q13228 472 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 CBFBQ13951 182 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 PDCD4Q53EL6 469 aaKnown RBP15.17■□□□□ 0.02
BRCC3-202ENST00000340647 TFAP2EQ6VUC0 442 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 PLEKHM3Q6ZWE6 761 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 FCRLAQ7L513 359 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 GABRG1Q8N1C3 465 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 TMCO5AQ8N6Q1 288 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 OR9I1Q8NGQ6 314 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 RAB3IL1Q8TBN0 382 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 IGFBPL1Q8WX77 278 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 CNOT9Q92600 299 aaKnown RBP15.17■□□□□ 0.02
BRCC3-202ENST00000340647 CPNE4Q96A23 557 aaPredicted RBP15.17■□□□□ 0.02
BRCC3-202ENST00000340647 ZC3HAV1LQ96H79 300 aaKnown RBP15.17■□□□□ 0.02
BRCC3-202ENST00000340647 OR52E6Q96RD3 313 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 MED18Q9BUE0 208 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 CCDC106Q9BWC9 280 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 C12orf49Q9H741 205 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 GLRX2Q9NS18 164 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 ACER3Q9NUN7 267 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 EXD2Q9NVH0 621 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 EMC9Q9Y3B6 208 aa15.17■□□□□ 0.02
BRCC3-202ENST00000340647 ZNF814B7Z6K7 855 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 KLF11O14901 512 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 SMAD9O15198 467 aaKnown RBP15.16■□□□□ 0.02
BRCC3-202ENST00000340647 CD99P14209 185 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 HOXB9P17482 250 aaPredicted RBP15.16■□□□□ 0.02
BRCC3-202ENST00000340647 HOXC12P31275 282 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 KCNJ5P48544 419 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 KHKP50053 298 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 CCR4P51679 360 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 CTBP2P56545 445 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 RAC3P60763 192 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 TSC22D1Q15714 1073 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 GTDC1Q4AE62 458 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 FBXW10Q5XX13 1052 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 SEZ6L2Q6UXD5 910 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 EIF3MQ7L2H7 374 aaKnown RBP15.16■□□□□ 0.02
BRCC3-202ENST00000340647 WFDC11Q8NEX6 87 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 VPS37AQ8NEZ2 397 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 PNPT1Q8TCS8 783 aaKnown RBP15.16■□□□□ 0.02
BRCC3-202ENST00000340647 ST8SIA1Q92185 356 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 PIK3IP1Q96FE7 263 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 PANX1Q96RD7 426 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 PSD2Q9BQI7 771 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 RSPO3Q9BXY4 272 aaPredicted RBP15.16■□□□□ 0.02
BRCC3-202ENST00000340647 POLE3Q9NRF9 147 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 SDR39U1Q9NRG7 319 aaPredicted RBP15.16■□□□□ 0.02
BRCC3-202ENST00000340647 KLHL13Q9P2N7 655 aa15.16■□□□□ 0.02
BRCC3-202ENST00000340647 TRPC5OSA6NMA1 111 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 AP3D1O14617 1153 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 CASKO14936 926 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 CYP7B1O75881 506 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 PLGP00747 810 aaPredicted RBP15.15■□□□□ 0.02
BRCC3-202ENST00000340647 PLAUP00749 431 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 PSMB1P20618 241 aaKnown RBP15.15■□□□□ 0.02
BRCC3-202ENST00000340647 NTF4P34130 210 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 CHI3L1P36222 383 aaPredicted RBP15.15■□□□□ 0.02
BRCC3-202ENST00000340647 KCNJ10P78508 379 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 PDSS1Q5T2R2 415 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 ATG16L1Q676U5 607 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 ZNF621Q6ZSS3 439 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 ADGRG3Q86Y34 549 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 PIWIL2Q8TC59 973 aaKnown RBP15.15■□□□□ 0.02
BRCC3-202ENST00000340647 OIT3Q8WWZ8 545 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 VPS33AQ96AX1 596 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 ARL5BQ96KC2 179 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 TRNT1Q96Q11 434 aaKnown RBP15.15■□□□□ 0.02
BRCC3-202ENST00000340647 BCO1Q9HAY6 547 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 CTPS2Q9NRF8 586 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 CHST2Q9Y4C5 530 aa15.15■□□□□ 0.02
BRCC3-202ENST00000340647 AGAP5A6NIR3 686 aa15.14■□□□□ 0.01
BRCC3-202ENST00000340647 CYTIPO60759 359 aa15.14■□□□□ 0.01
BRCC3-202ENST00000340647 AGR2O95994 175 aa15.14■□□□□ 0.01
BRCC3-202ENST00000340647 MERTKQ12866 999 aa15.14■□□□□ 0.01
BRCC3-202ENST00000340647 KEAP1Q14145 624 aa15.14■□□□□ 0.01
BRCC3-202ENST00000340647 RNPS1Q15287 305 aaKnown RBP15.14■□□□□ 0.01
BRCC3-202ENST00000340647 GPAT3Q53EU6 434 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms