RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 CCDC120Q96HB5 630 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 TNFRSF13CQ96RJ3 184 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 DPCDQ9BVM2 203 aaPredicted RBP18.39■□□□□ 0.53
CRLF3-201ENST00000324238 MTHFD2LQ9H903 347 aaPredicted RBP18.39■□□□□ 0.53
CRLF3-201ENST00000324238 IL21RQ9HBE5 538 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 PHPT1Q9NRX4 125 aaPredicted RBP18.39■□□□□ 0.53
CRLF3-201ENST00000324238 STARD5Q9NSY2 213 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 A0A0G2JK05 382 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 GXYLT2A0PJZ3 443 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 FAM171A2A8MVW0 826 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 SOX30O94993 753 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 ATF1P18846 271 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 GDI1P31150 447 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 TFF2Q03403 129 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 LRRC25Q8N386 305 aaPredicted RBP18.39■□□□□ 0.53
CRLF3-201ENST00000324238 FAM109AQ8N4B1 249 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 BPIFA2Q96DR5 249 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 C10orf90Q96M02 699 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 PDCD1LG2Q9BQ51 273 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 TEX101Q9BY14 249 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 TBC1D29Q9UFV1 150 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 TMEM5Q9Y2B1 443 aa18.39■□□□□ 0.53
CRLF3-201ENST00000324238 PRKNO60260 465 aaPredicted RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 ADAM11O75078 769 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 OR5F1O95221 314 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 LAMP2P13473 410 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 CLDN12P56749 244 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 VSX2P58304 361 aaPredicted RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF85Q03923 595 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 GPM6BQ13491 265 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 YAF2Q8IY57 180 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 TMEM52Q8NDY8 209 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 TTLQ8NG68 377 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 OR4K13Q8NH42 304 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 SMPDL3BQ92485 455 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 NDC1Q9BTX1 674 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 CACNG6Q9BXT2 260 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 RBCK1Q9BYM8 510 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 ZFP64Q9NPA5 681 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 MEPEQ9NQ76 525 aaPredicted RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 THAP10Q9P2Z0 257 aaPredicted RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 CARNS1A5YM72 827 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 LEUTXA8MZ59 168 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 IDSB3KWA1 339 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 TCRBP04435 133 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 PVRP15151 417 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF761Q86XN6 746 aaPredicted RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 TOMM5Q8N4H5 51 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 SDR9C7Q8NEX9 313 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 HDAC8Q9BY41 377 aa18.38■□□□□ 0.53
CRLF3-201ENST00000324238 CACYBPQ9HB71 228 aaKnown RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF346Q9UL40 294 aaKnown RBP18.38■□□□□ 0.53
CRLF3-201ENST00000324238 FCER2P06734 321 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 GALEQ14376 348 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 THAP4Q8WY91 577 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 CHIAQ9BZP6 476 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 EVA1BQ9NVM1 165 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 PRICKLE3O43900 615 aaPredicted RBP18.37■□□□□ 0.53
CRLF3-201ENST00000324238 CTSVO60911 334 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 MT-ND5P03915 603 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 NT5EP21589 574 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 LIX1LQ8IVB5 337 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 SLC44A3Q8N4M1 653 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 PATE1Q8WXA2 126 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF764Q96H86 408 aaPredicted RBP18.37■□□□□ 0.53
CRLF3-201ENST00000324238 HYLS1Q96M11 299 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 DERL3Q96Q80 235 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 OR51J1Q9H342 316 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 CALML5Q9NZT1 146 aa18.37■□□□□ 0.53
CRLF3-201ENST00000324238 ARHGEF17Q96PE2 2063 aaPredicted RBP18.37■□□□□ 0.53
CRLF3-201ENST00000324238 C4orf47A7E2U8 309 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 EEF1A1P68104 462 aaKnown RBP18.36■□□□□ 0.53
CRLF3-201ENST00000324238 NNATQ16517 81 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 FAAH2Q6GMR7 532 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 FAAP20Q6NZ36 180 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ENPP7Q6UWV6 458 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 CREB3L2Q70SY1 520 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ZNRF4Q8WWF5 429 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 RELTQ969Z4 430 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 MS4A4EQ96PG1 132 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 COQ7Q99807 217 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 SLC17A9Q9BYT1 436 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 SLC25A18Q9H1K4 315 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ADGRL4Q9HBW9 690 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF223Q9UK11 482 aaPredicted RBP18.36■□□□□ 0.53
CRLF3-201ENST00000324238 TRAPPC13A5PLN9 417 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 OR2W5A6NFC9 320 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 DHFRP00374 187 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 WNT1P04628 370 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 SBK2P0C263 348 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ZNF250P15622 560 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 NPR2P20594 1047 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 CMPK1P30085 196 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 PPP2CBP62714 309 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 PPP2CAP67775 309 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 ST3GAL2Q16842 350 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 C7orf61Q8IZ16 206 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 OR4K14Q8NGD5 310 aa18.36■□□□□ 0.53
CRLF3-201ENST00000324238 CNOT9Q92600 299 aaKnown RBP18.36■□□□□ 0.53
CRLF3-201ENST00000324238 OR14A2Q96R54 314 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms