RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 SLC35G6P0C7Q6 338 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 ZNF888P0CJ79 500 aaPredicted RBP13.73□□□□□ -0.21
CCT3-201ENST00000295688 SLC2A5P22732 501 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 GIFP27352 417 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 HTR2AP28223 471 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 SRP9P49458 86 aaKnown RBP13.73□□□□□ -0.21
CCT3-201ENST00000295688 PDGFRLQ15198 375 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 CST6Q15828 149 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 MRPL2Q5T653 305 aaKnown RBP13.73□□□□□ -0.21
CCT3-201ENST00000295688 FAM27D1Q5T7N8 215 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 ZNF613Q6PF04 617 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 OR56B4Q8NH76 319 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 SPPL3Q8TCT6 385 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 GHSRQ92847 366 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 LRFN5Q96NI6 719 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 ZNF559Q9BR84 538 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 CLEC4MQ9H2X3 399 aaPredicted RBP13.73□□□□□ -0.21
CCT3-201ENST00000295688 C6orf106Q9H6K1 298 aaPredicted RBP13.73□□□□□ -0.21
CCT3-201ENST00000295688 DUSP22Q9NRW4 184 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 ZMIZ1Q9ULJ6 1067 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 SPEF1Q9Y4P9 236 aa13.73□□□□□ -0.21
CCT3-201ENST00000295688 MEIKINA0A087WXM9 373 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 OGG1O15527 345 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 LATO43561 262 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 PAK4O96013 591 aaPredicted RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 CEACAM5P06731 702 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ZNF10P21506 573 aaPredicted RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 ACVR1BP36896 505 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 GBX2P52951 348 aaPredicted RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 ACTA2P62736 377 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ACTG2P63267 376 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SGCGQ13326 291 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SLC25A35Q3KQZ1 300 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 DCST2Q5T1A1 773 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ARHGAP11AQ6P4F7 1023 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 WDR88Q6ZMY6 472 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 RTL4Q6ZR62 310 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 OVCH1Q7RTY7 1134 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 TIGD4Q8IY51 512 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 DTX3Q8N9I9 347 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 CDRT4Q8N9R6 151 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 RPLP0P6Q8NHW5 317 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 HAVCR2Q8TDQ0 301 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 PHYHIPQ92561 330 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 MRPL48Q96GC5 212 aaKnown RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 STACQ99469 402 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ENKD1Q9H0I2 346 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 POLE3Q9NRF9 147 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 C20orf141Q9NUB4 165 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 KCMF1Q9P0J7 381 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 MOSPD1Q9UJG1 213 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SCP2D1Q9UJQ7 156 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SPATA2Q9UM82 520 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 RPS10-NUDT3A0A1W2PQS6 291 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 B3GALT2O43825 422 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 TMEM127O75204 238 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 PTP4A3O75365 173 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SNAPC5O75971 98 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 MRPL3P09001 348 aaKnown RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 SULT1A3P0DMM9 295 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SULT1A4P0DMN0 295 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 CPMP14384 443 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 C5AR1P21730 350 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SLC6A6P31641 620 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 PYCR1P32322 319 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 CLDN2P57739 230 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 OR12D2P58182 307 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SNTB2Q13425 540 aaKnown RBP13.72□□□□□ -0.21
CCT3-201ENST00000295688 GSG1Q2KHT4 349 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 FAM69AQ5T7M9 428 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 VN1R4Q7Z5H5 301 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SYS1Q8N2H4 156 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 KCT2Q8NC54 265 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 OR13C2Q8NGS9 318 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 HSD17B8Q92506 261 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 SLC22A18Q96BI1 424 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ARMC5Q96C12 935 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 ST6GALNAC2Q9UJ37 374 aa13.72□□□□□ -0.21
CCT3-201ENST00000295688 A0A087WV62 115 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 A0A1B0GVC2 190 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 OTOL1A6NHN0 477 aaPredicted RBP13.71□□□□□ -0.21
CCT3-201ENST00000295688 A6NIN4 97 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 RFXAPO00287 272 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 CD3GP09693 182 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 GKN3PP0CG01 181 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 EPXP11678 715 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 FUT1P19526 365 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 PRKACBP22694 351 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 ITGB8P26012 769 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 CLLU1Q5K131 121 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 EXOSC6Q5RKV6 272 aaKnown RBP13.71□□□□□ -0.21
CCT3-201ENST00000295688 GPR139Q6DWJ6 353 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 OR8H3Q8N146 312 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 COX18Q8N8Q8 333 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 C17orf47Q8NEP4 570 aa13.71□□□□□ -0.21
CCT3-201ENST00000295688 THAP4Q8WY91 577 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms