RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ATF7IP2Q5U623 682 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 FAM199XQ6PEV8 388 aaPredicted RBP3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 RBM43Q6ZSC3 357 aaKnown RBP3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 APTXQ7Z2E3 356 aaKnown RBP3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 LHFPL4Q7Z7J7 247 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 TMEM17Q86X19 198 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 NRMQ8IXM6 262 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 H1FOOQ8IZA3 346 aaPredicted RBP3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF786Q8N393 782 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF740Q8NDX6 193 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 AENQ8WTP8 325 aaKnown RBP3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 VPS35Q96QK1 796 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 ECT2Q9H8V3 914 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 PATZ1Q9HBE1 687 aaKnown RBP3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 VAT1LQ9HCJ6 419 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 CYTL1Q9NRR1 136 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 ATXN10Q9UBB4 475 aa3.02□□□□□ -1.93
SCAMP1-205ENST00000614488 RASGRF2O14827 1237 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 HCN1O60741 890 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF780AO75290 641 aaPredicted RBP3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 WISP3O95389 354 aaPredicted RBP3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 RNH1P13489 461 aaKnown RBP3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 FUT1P19526 365 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 IL10P22301 178 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 CD80P33681 288 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 PTGFRP43088 359 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 RPS10P46783 165 aaKnown RBP3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 LINC00315P59091 139 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 HSF2Q03933 536 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 RAB40BQ12829 278 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 LINC01620Q4KN68 170 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF311Q5JNZ3 666 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 CASC10Q5T4H9 136 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 ACSM5Q6NUN0 579 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 NIPAL3Q6P499 406 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 CENPUQ71F23 418 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 MISPQ8IVT2 679 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 HDDC3Q8N4P3 179 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 GPATCH11Q8N954 259 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 OR52B4Q8NGK2 314 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 UCN3Q969E3 161 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF385DQ9H6B1 395 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 MGAT4BQ9UQ53 548 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 UGT2A1Q9Y4X1 527 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 NEUROG3Q9Y4Z2 214 aa3.01□□□□□ -1.93
SCAMP1-205ENST00000614488 A0A0U1RQV5 110 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 ESYT2A0FGR8 921 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 HELTA6NFD8 242 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 FAM166BA8MTA8 275 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 FCN1O00602 326 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 STX7O15400 261 aaKnown RBP3□□□□□ -1.93
SCAMP1-205ENST00000614488 HCRTR1O43613 425 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 DFNA5O60443 496 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 SLITRK3O94933 977 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 DNAJB1P25685 340 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 MAGEA5P43359 124 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 CSNK1DP48730 415 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 CSNK1G2P78368 415 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 CCDC173Q0VFZ6 552 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 ARFRP1Q13795 201 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 GPNMBQ14956 572 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 C16orf72Q14CZ0 275 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF691Q5VV52 312 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 RAET1GQ6H3X3 334 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 LRRC8BQ6P9F7 803 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 PP632Q6XCG6 107 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 SYT10Q6XYQ8 523 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 MDS2Q8NDY4 140 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 NANPQ8TBE9 248 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 MARCH1Q8TCQ1 289 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 MS4A14Q96JA4 679 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 AKR1E2Q96JD6 320 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 POLR2J2Q9GZM3 115 aaKnown RBP3□□□□□ -1.93
SCAMP1-205ENST00000614488 POLR2J3Q9H1A7 115 aaKnown RBP3□□□□□ -1.93
SCAMP1-205ENST00000614488 CARMIL1Q5VZK9 1371 aa3□□□□□ -1.93
SCAMP1-205ENST00000614488 TTC21BQ7Z4L5 1316 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 IGKV2D-24A0A075B6R9 120 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 NKX2-6A6NCS4 301 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 JAK2O60674 1132 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 ICOSLGO75144 302 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 VPS26AO75436 327 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 UGT2B17O75795 530 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 STMN1P16949 149 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 RCC1P18754 421 aaPredicted RBP2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 KIF5BP33176 963 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 RAB12Q6IQ22 244 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 PLBD1Q6P4A8 553 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 C16orf62Q7Z3J2 963 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 ZNF429Q86V71 674 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 MRPL38Q96DV4 380 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 FAM210BQ96KR6 192 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 KCNK16Q96T55 309 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 PRPF19Q9UMS4 504 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 B9D1Q9UPM9 204 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 NCAPD2Q15021 1401 aa2.99□□□□□ -1.93
SCAMP1-205ENST00000614488 SCN2AQ99250 2005 aa2.98□□□□□ -1.93
SCAMP1-205ENST00000614488 A6NDX4 124 aa2.98□□□□□ -1.93
SCAMP1-205ENST00000614488 GJE1A6NN92 205 aa2.98□□□□□ -1.93
SCAMP1-205ENST00000614488 CCER2I3L3R5 266 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms