RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ARL8AQ96BM9 186 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF775Q96BV0 537 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 MUCL1Q96DR8 90 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 RHOXF2Q9BQY4 288 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 GATA5Q9BWX5 397 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ACTRT3Q9BYD9 372 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 POTEKPQ9BYX7 375 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 CXorf36Q9H7Y0 433 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 COQ10BQ9H8M1 238 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ANKZF1Q9H8Y5 726 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 GP6Q9HCN6 339 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 KLHL9Q9P2J3 617 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 PRSS50Q9UI38 385 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 MID2Q9UJV3 735 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 GDF2Q9UK05 429 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ICAM5Q9UMF0 924 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 ARFGEF3Q5TH69 2177 aa9.37□□□□□ -0.91
CHMP2A-202ENST00000596708 RNF212BA8MTL3 300 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TMEM114B3SHH9 223 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 CFLARO15519 480 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TLX2O43763 284 aaPredicted RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 CD5LO43866 347 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 SSX4O60224 188 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TRIM13O60858 407 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 RAMP1O60894 148 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 IGHV4-39P01824 125 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 KRT16P08779 473 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 PTNP21246 168 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 MAPK1P28482 360 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 OR3A2P47893 321 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 C21orf58P58505 322 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 PPA1Q15181 289 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 PGGHGQ32M88 737 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 NDUFAF6Q330K2 333 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 LSM12Q3MHD2 195 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 KLHL26Q53HC5 615 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 EXOSC6Q5RKV6 272 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 DCST2Q5T1A1 773 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 KANK2Q63ZY3 851 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 RNF165Q6ZSG1 346 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 Q6ZT83 130 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TDRPQ86YL5 185 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 HOMEZQ8IX15 550 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 GSPT2Q8IYD1 628 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF100Q8IYN0 542 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 C4orf33Q8N1A6 199 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TOR1AIP2Q8NFQ8 470 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 OR56A1Q8NGH5 318 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TWIST2Q8WVJ9 160 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 UBLCP1Q8WVY7 318 aaPredicted RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 OR5P2Q8WZ92 322 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 MRGPRX4Q96LA9 322 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 OR5B2Q96R09 309 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 PSD2Q9BQI7 771 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 RHNO1Q9BSD3 238 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TRAF4Q9BUZ4 470 aaPredicted RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TXLNGYQ9BZA5 131 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 TRIM2Q9C040 744 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 BARX1Q9HBU1 254 aaPredicted RBP9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 FAIMQ9NVQ4 179 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 GIMAP2Q9UG22 337 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 ATP6V1HQ9UI12 483 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 DTNAQ9Y4J8 743 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 DNAJC15Q9Y5T4 150 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 ACTL7BQ9Y614 415 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 KCNE3Q9Y6H6 103 aa9.36□□□□□ -0.91
CHMP2A-202ENST00000596708 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 ABCD4O14678 606 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 PIP5K1BO14986 540 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 SCAMP2O15127 329 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF264O43296 627 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 EIF4E2O60573 245 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 PEX11AO75192 247 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 CYP7B1O75881 506 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 C6orf47O95873 294 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 CD8AP01732 235 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 SHBGP04278 402 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 LAMP1P11279 417 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 KRT4P19013 534 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 CBFBQ13951 182 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 PCLAFQ15004 111 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 QPRTQ15274 297 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 GPR68Q15743 365 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 TIGD2Q4W5G0 525 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 AGAP6Q5VW22 663 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 DNAJC14Q6Y2X3 702 aaPredicted RBP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 HIPK1Q86Z02 1210 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 NATD1Q8N6N6 113 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 AGR3Q8TD06 166 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 PPP3R2Q96LZ3 170 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 OR7D2Q96RA2 312 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 ZNF300Q96RE9 604 aaPredicted RBP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 PRPF18Q99633 342 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 TRMOQ9BU70 441 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 BCO1Q9HAY6 547 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 ATAD3AQ9NVI7 634 aa9.35□□□□□ -0.91
CHMP2A-202ENST00000596708 TRAF6Q9Y4K3 522 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms