RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 LATO43561 262 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 FBXO45P0C2W1 286 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 UBL4AP11441 157 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 MSI2Q96DH6 328 aaKnown RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 BSCL2Q96G97 398 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 BORCS6Q96GS4 357 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 LPAR4Q99677 370 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 HEPACAM2A8MVW5 462 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 PPP1R2P9O14990 202 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 NPC1O15118 1278 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 TCAPO15273 167 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ENSAO43768 121 aaKnown RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 TAP2Q03519 686 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 MGAT3Q09327 533 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 HACD4Q5VWC8 232 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 CPZQ66K79 652 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 NADSYN1Q6IA69 706 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF585AQ6P3V2 769 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 VASH1Q7L8A9 365 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 CDRT4Q8N9R6 151 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 SLC25A18Q9H1K4 315 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 OR51E2Q9H255 320 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF768Q9H5H4 540 aaKnown RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ARNT2Q9HBZ2 717 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 VSX1Q9NZR4 365 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 POMT1Q9Y6A1 747 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 CSNK1G3Q9Y6M4 447 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 A0A1W2PS29 197 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 NUDT19A8MXV4 375 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 DVL2O14641 736 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 RPS5P46782 204 aaKnown RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 HTR6P50406 440 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 FAM189BP81408 668 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 CNN3Q15417 329 aaKnown RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 DUSP7Q16829 419 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 BPHLQ86WA6 291 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 APCDD1Q8J025 514 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 NLGN4YQ8NFZ3 816 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 BRIX1Q8TDN6 353 aaKnown RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 TMEM239Q8WW34 195 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF578Q96N58 590 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-208ENST00000538570 ZFYVE21Q9BQ24 234 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 SLC25A31Q9H0C2 315 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 SLC2A9Q9NRM0 540 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 IER3IP1Q9Y5U9 82 aa9.36□□□□□ -0.91
COL4A6-208ENST00000538570 RAD1O60671 282 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 MMP2P08253 660 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 BMP4P12644 408 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 PIN1Q13526 163 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 RNF212Q495C1 297 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 FAM185AQ8N0U4 392 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 CYB561A3Q8NBI2 242 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 IL17RDQ8NFM7 739 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR9K2Q8NGE7 335 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ZFPM2Q8WW38 1151 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 UHRF1Q96T88 793 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR10A5Q9H207 317 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR10A2Q9H208 303 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 KIF25Q9UIL4 384 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SLC6A14Q9UN76 642 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ANKRD30BLA7E2S9 258 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 D6RAR5 112 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 F5H5K5 113 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 G3V2L1 256 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 FUT1P19526 365 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 HOXA9P31269 272 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 VEZF1Q14119 521 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 PDZD11Q5EBL8 140 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 RTL6Q6ICC9 239 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 B3GNT9Q6UX72 402 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 DTWD1Q8N5C7 304 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SDR9C7Q8NEX9 313 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 B3GNT7Q8NFL0 401 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR5B2Q96R09 309 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SNX18Q96RF0 628 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 KAT6AQ92794 2004 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 CD79AP11912 226 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 GCH1P30793 250 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 RABIFP47224 123 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 IL13RA1P78552 427 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 GLO1Q04760 184 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 RAB40BQ12829 278 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 P2RY14Q15391 338 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 CLPPQ16740 277 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ACSM3Q53FZ2 586 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF542PQ5EBM4 170 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SIGIRRQ6IA17 410 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 Q6ZNX1 250 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 USP53Q70EK8 1073 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR5D14Q8NGL3 314 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR9A2Q8NGT5 310 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 OR2A12Q8NGT7 310 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 ZBTB8AQ96BR9 441 aa9.35□□□□□ -0.91
COL4A6-208ENST00000538570 FOXRED1Q96CU9 486 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 SENP5Q96HI0 755 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-208ENST00000538570 MYADMQ96S97 322 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms