RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ASCL2Q99929 193 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 AGPAT1Q99943 283 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 ZNF670Q9BS34 389 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 ADI1Q9BV57 179 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 OSBPL11Q9BXB4 747 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 WWTR1Q9GZV5 400 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 IFT22Q9H7X7 185 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 DYNLRB1Q9NP97 96 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 CCDC177Q9NQR7 707 aaPredicted RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 SNX15Q9NRS6 342 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 GLRX2Q9NS18 164 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 MCTS1Q9ULC4 181 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 SNRNP200O75643 2136 aaKnown RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 IGHV3OR16-10A0A075B7F0 116 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 A0A088AWK7 358 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 A0A1W2PR80 420 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CIB4A0PJX0 185 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ATP6V1G2-DDX39BF2Z307 99 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 APOL1O14791 398 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 WNT9BO14905 357 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 KERAO60938 352 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 LDB3O75112 727 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 GUCA1CO95843 209 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 SBK3P0C264 359 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 OR4A8P0C604 315 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 RHOXF2BP0C7M4 288 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ERGP11308 486 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PSG1P11464 419 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CDH1P12830 882 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 IGLL1P15814 213 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CDH2P19022 906 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 ZNF10P21506 573 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 CNTFP26441 200 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 AGTR1P30556 359 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 SLC1A3P43003 542 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PPOXP50336 477 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ATP4BP51164 291 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 GEMP55040 296 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CLDN20P56880 219 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 POLR2FP61218 127 aaKnown RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 HERVK_113P63132 956 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ERVK-8P63133 956 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 DYNLT1P63172 113 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 MALLQ13021 153 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 SLAMF1Q13291 335 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 GBX1Q14549 363 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PRPSAP1Q14558 356 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ZNF267Q14586 743 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.877e-14■■■□□ 17.9
YBX3-205ENST00000536107 PDK2Q15119 407 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 TPD52L1Q16890 204 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 NSUN5P1Q3KNT7 163 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 KRT71Q3SY84 523 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 TIMM23BQ5SRD1 257 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 MFSD12Q6NUT3 480 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PPP1R2P3Q6NXS1 205 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 NPNTQ6UXI9 565 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ZNF771Q7L3S4 317 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 TBC1D1Q86TI0 1168 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 P2RY8Q86VZ1 359 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CARM1Q86X55 608 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PQLC3Q8N755 202 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 C11orf44Q8N8P7 122 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 GPATCH11Q8N954 259 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 WDSUB1Q8N9V3 476 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 OR52B6Q8NGF0 335 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 FAM110BQ8TC76 370 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CCT6BQ92526 530 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 POP5Q969H6 163 aaKnown RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 FAM136AQ96C01 138 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 RAB39BQ96DA2 213 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PANX3Q96QZ0 392 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 KCNS3Q9BQ31 491 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ERVK-6Q9BXR3 956 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 PCBD2Q9H0N5 130 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 NDST4Q9H3R1 872 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 KLHL31Q9H511 634 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 DENND2DQ9H6A0 471 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 ZNF665Q9H7R5 613 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 MARCH7Q9H992 704 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 MRPL47Q9HD33 250 aaKnown RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 SIRT3Q9NTG7 399 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 NLE1Q9NVX2 485 aaPredicted RBP3.34□□□□□ -1.87
YBX3-205ENST00000536107 OPN4Q9UHM6 478 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 FBXL2Q9UKC9 423 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ERVK-19Q9WJR5 959 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 ZNF337Q9Y3M9 751 aa3.34□□□□□ -1.87
YBX3-205ENST00000536107 CSMD3Q7Z407 3707 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 MDFIC2A0A1B0GVS7 189 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 C1orf226A1L170 272 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 CCDC162PA2VCL2 907 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 OR5H1A6NKK0 313 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 C3orf70A6NLC5 250 aaPredicted RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 VSTM5A8MXK1 200 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 POC1B-GALNT4F8VUJ3 575 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 RGS14O43566 566 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 SLC25A17O43808 307 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ZIC3O60481 467 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ANXA9O76027 345 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 TJP3O95049 919 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms