RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 LINC00696Q6ZRV3 163 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 ZNF227Q86WZ6 799 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 MEX3DQ86XN8 651 aaKnown RBP13.75□□□□□ -0.21
SREK1-209ENST00000520953 HIPK1Q86Z02 1210 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 TMEM156Q8N614 296 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 DUSP19Q8WTR2 217 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 REEP1Q9H902 201 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 PLA2G3Q9NZ20 509 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 ACAD8Q9UKU7 415 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
SREK1-209ENST00000520953 TNFRSF11BO00300 401 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 NDUFB5O43674 189 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 CDC20Q12834 499 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 AIMP2Q13155 320 aaKnown RBP13.75□□□□□ -0.21
SREK1-209ENST00000520953 EFR3AQ14156 821 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 TOMM34Q15785 309 aaPredicted RBP13.75□□□□□ -0.21
SREK1-209ENST00000520953 DEFB109BQ30KR1 87 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 TTC23Q5W5X9 447 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 NUP54Q7Z3B4 507 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 TMCO5AQ8N6Q1 288 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 CLEC1AQ8NC01 280 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 ZFAND2BQ8WV99 257 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 PRRC1Q96M27 445 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 FER1L6-AS2Q96M78 137 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 IP6K3Q96PC2 410 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 YTHDF1Q9BYJ9 559 aaKnown RBP13.75□□□□□ -0.21
SREK1-209ENST00000520953 ING2Q9H160 280 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
SREK1-209ENST00000520953 A0A0G2JMM0 328 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 A0A1W2PPB8 328 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 A0A1W2PRS3 328 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 KIR3DP1A8MWS1 328 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 GTPBP1O00178 669 aaKnown RBP13.74□□□□□ -0.21
SREK1-209ENST00000520953 HCRTR2O43614 444 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 NGFRP08138 427 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 NAGAP17050 411 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 ITGA2P17301 1181 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 MST1P26927 711 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 LIMS1P48059 325 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 TAS2R41P59536 307 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 EPS8Q12929 822 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 LSAMPQ13449 338 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 OR1Q1Q15612 314 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 FGD3Q5JSP0 725 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 WDR88Q6ZMY6 472 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 PLEKHM3Q6ZWE6 761 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 THAP5Q7Z6K1 395 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 GRAMD2AQ8IUY3 354 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 NKAIN4Q8IVV8 208 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 GALNT16Q8N428 558 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 ZNF248Q8NDW4 579 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 OR9Q2Q8NGE9 314 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 RNF138Q8WVD3 245 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 SLC39A7Q92504 469 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 LHPPQ9H008 270 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 GABARAPL1Q9H0R8 117 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 PROK2Q9HC23 129 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 STMN3Q9NZ72 180 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 PTTG2Q9NZH5 202 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 KLRF1Q9NZS2 232 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 CPAMD8Q8IZJ3 1885 aa13.74□□□□□ -0.21
SREK1-209ENST00000520953 PRRC2CQ9Y520 2896 aaKnown RBP13.74□□□□□ -0.21
SREK1-209ENST00000520953 ZNF264O43296 627 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 GADD45GO95257 159 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 LYPD3O95274 346 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 ELAVL4P26378 380 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 EIF2S3P41091 472 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 CASP3P42574 277 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 HLCSP50747 726 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 ROR2Q01974 943 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 OPN5Q6U736 354 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 B3GNT6Q6ZMB0 384 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 C8orf59Q8N0T1 100 aaPredicted RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 CADM2Q8N3J6 435 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 SLC15A4Q8N697 577 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 ZNF555Q8NEP9 628 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 SLC7A13Q8TCU3 470 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 TMCO6Q96DC7 493 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 CCNL2Q96S94 520 aaPredicted RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 NPAS1Q99742 590 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 SLC35A3Q9Y2D2 325 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 DSPP15924 2871 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 MITFO75030 526 aaPredicted RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 H1F0P07305 194 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 POLR2IP36954 125 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 ADH7P40394 386 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 TMED10P49755 219 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 MEP1AQ16819 746 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 SPINK14Q6IE38 97 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 CYP4Z1Q86W10 505 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 CMIPQ8IY22 773 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 PIK3C3Q8NEB9 887 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 SNIP1Q8TAD8 396 aaKnown RBP13.73□□□□□ -0.21
SREK1-209ENST00000520953 THAP4Q8WY91 577 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 TTC9Q92623 222 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 DHRS1Q96LJ7 313 aa13.73□□□□□ -0.21
SREK1-209ENST00000520953 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms