RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZBTB11O95625 1053 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 NGFRP08138 427 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ALPIP09923 528 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 NUDT17P0C025 328 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 THRBP10828 461 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 MCF2P10911 925 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC2A2P11168 524 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CTSEP14091 401 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 NCF1P14598 390 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 GP9P14770 177 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 POLR2EP19388 210 aaKnown RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CEACAM8P31997 349 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CDKN1AP38936 164 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CA7P43166 264 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 TAF6P49848 677 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 DCDC1P59894 354 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CDR2Q01850 454 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 HSF2Q03933 536 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CNTN1Q12860 1018 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 HEPACAMQ14CZ8 416 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ELOCQ15369 112 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CFAP221Q4G0U5 840 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZCCHC12Q6PEW1 402 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 PAMR1Q6UXH9 720 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ISLR2Q6UXK2 745 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 C16orf82Q7Z2V1 217 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 C1QL2Q7Z5L3 287 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 TEX26Q8N6G2 289 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 LRRC17Q8N6Y2 441 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 BCORP1Q8N888 145 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 LMNTD1Q8N9Z9 388 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR5T2Q8NGG2 359 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CHPT1Q8WUD6 406 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNRF4Q8WWF5 429 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF606Q8WXB4 792 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CRYGNQ8WXF5 182 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCDC127Q96BQ5 260 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 BPIFA2Q96DR5 249 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF48Q96MX3 618 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 TAAR6Q96RI8 345 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 WRAP53Q9BUR4 548 aaKnown RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 TDRD1Q9BXT4 1180 aaKnown RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 SIRPDQ9H106 197 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 S100A14Q9HCY8 104 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 DDX28Q9NUL7 540 aaKnown RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 HACD3Q9P035 362 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 NDUFA13Q9P0J0 144 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 MRTO4Q9UKD2 239 aaKnown RBP4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 CLEC4EQ9ULY5 219 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 WDR37Q9Y2I8 494 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 TRRAPQ9Y4A5 3859 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 HCFC1P51610 2035 aa4.09□□□□□ -1.76
HMGB1P23-201ENST00000518743 ANK3Q12955 4377 aaKnown RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF732B4DXR9 585 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GPR89AB7ZAQ6 455 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 F8VP50 259 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 POLR1CO15160 346 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GMFGO60234 142 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 TOM1L1O75674 476 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 CEACAM4O75871 244 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 PTBP3O95758 552 aaKnown RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 PAK4O96013 591 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 OPN1MWP04001 364 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GPR89BP0CG08 455 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 TPBGLP0DKB5 382 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 OPN1MW2P0DN77 364 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 OPN1MW3P0DN78 364 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 RRASP10301 218 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 RPS2P15880 293 aaKnown RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 SOX6P35712 828 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 TRPC1P48995 793 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR1D5P58170 312 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 HERV-K104P63124 156 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 OTUD4Q01804 1114 aaKnown RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 MFGE8Q08431 387 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GPAT3Q53EU6 434 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 TMEM41BQ5BJD5 291 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 ATAD3BQ5T9A4 648 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 C9orf57Q5W0N0 161 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 RTL6Q6ICC9 239 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC25A24Q6NUK1 477 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 PIGZQ86VD9 579 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GKN2Q86XP6 184 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF573Q86YE8 665 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 HRNRQ86YZ3 2850 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 CENPLQ8N0S6 344 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 STK40Q8N2I9 435 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 POC1AQ8NBT0 407 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GIPC3Q8TF64 312 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 MYLPFQ96A32 169 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 GIMAP5Q96F15 307 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF274Q96GC6 653 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 THOC3Q96J01 351 aaKnown RBP4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 LYZL4Q96KX0 146 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 IFT74Q96LB3 600 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 PSD2Q9BQI7 771 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 ACBD6Q9BR61 282 aa4.08□□□□□ -1.76
HMGB1P23-201ENST00000518743 PIGQQ9BRB3 760 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms