RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 STARP49675 285 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 CLDN18P56856 261 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 RPS3AP61247 264 aaKnown RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 RAC1P63000 192 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 PMPCAQ10713 525 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 ART3Q13508 389 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 QPRTQ15274 297 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 ADRM1Q16186 407 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 ACSF3Q4G176 576 aaPredicted RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 SLC25A53Q5H9E4 307 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 ZNF311Q5JNZ3 666 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 INTS11Q5TA45 600 aaKnown RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 NSUN5P2Q63ZY6 315 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 HMGN2P46Q86SG4 172 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 GRAMD2AQ8IUY3 354 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 LACC1Q8IV20 430 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 C10orf111Q8N326 155 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 OR5M1Q8NGP8 315 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 OR10A6Q8NH74 314 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 ZNF563Q8TA94 476 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 SLC35B4Q969S0 331 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 RNF145Q96MT1 663 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 HOPXQ9BPY8 73 aaPredicted RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 SLC39A3Q9BRY0 314 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 SERINC1Q9NRX5 453 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 PAQR5Q9NXK6 330 aaPredicted RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 ZNF443Q9Y2A4 671 aaPredicted RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 FAM215AQ9Y5M1 114 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 NCOA6Q14686 2063 aaPredicted RBP13.54□□□□□ -0.24
RNF4-210ENST00000508235 CFAP73A6NFT4 308 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 CD8B2A6NJW9 211 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 CLDN24A6NM45 220 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 FAAHO00519 579 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 NDUFAB1O14561 156 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 AIM2O14862 343 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 PSMA4P25789 261 aaKnown RBP13.54□□□□□ -0.24
RNF4-210ENST00000508235 PRKAR1BP31321 381 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 EEF1A1P68104 462 aaKnown RBP13.54□□□□□ -0.24
RNF4-210ENST00000508235 ADORA2A-AS1P86434 159 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 FOXF1Q12946 379 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 SELPLGQ14242 412 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 RABL3Q5HYI8 236 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 PDSS1Q5T2R2 415 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 ERICH5Q6P6B1 374 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 ZNF550Q7Z398 422 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 MRGPRGQ86SM5 289 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 VRK2Q86Y07 508 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 PTOV1Q86YD1 416 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 TREML1Q86YW5 311 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 FBXO27Q8NI29 283 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 ASB5Q8WWX0 329 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
RNF4-210ENST00000508235 TRIB1Q96RU8 372 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 TRIM8Q9BZR9 551 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 EVA1AQ9H8M9 152 aa13.54□□□□□ -0.24
RNF4-210ENST00000508235 DNAJB12Q9NXW2 375 aaKnown RBP13.54□□□□□ -0.24
RNF4-210ENST00000508235 UBR5O95071 2799 aaPredicted RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 ETV2O00321 342 aaPredicted RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 SEC14L5O43304 696 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 NTN1O95631 604 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 IL2RAP01589 272 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 GLI4P10075 376 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 GP1BBP13224 206 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 FKBP2P26885 142 aaKnown RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 RYKP34925 604 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 PCGF2P35227 344 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 TIMP3P35625 211 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 HTR3AP46098 478 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 NUDT2P50583 147 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 NUP107P57740 925 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 SESN3P58005 492 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 SELENBP1Q13228 472 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 TOMM34Q15785 309 aaPredicted RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 HSPB2Q16082 182 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 RIPPLY2Q5TAB7 128 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 ESPNLQ6ZVH7 1005 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 PATL1Q86TB9 770 aaKnown RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 ZZZ3Q8IYH5 903 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 UBQLNLQ8IYU4 475 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 CCDC197Q8NCU1 140 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 OR10Q1Q8NGQ4 319 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 POC1BQ8TC44 478 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 ITLN2Q8WWU7 325 aaPredicted RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 SMPDL3BQ92485 455 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 REXO5Q96IC2 774 aaKnown RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 UCN2Q96RP3 112 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 TM9SF2Q99805 663 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 TUBA1CQ9BQE3 449 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 ACER3Q9NUN7 267 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 SLC13A4Q9UKG4 626 aa13.53□□□□□ -0.24
RNF4-210ENST00000508235 DIDO1Q9BTC0 2240 aaKnown RBP13.53□□□□□ -0.24
RNF4-210ENST00000508235 MBD3L4A6NDZ8 208 aaPredicted RBP13.52□□□□□ -0.25
RNF4-210ENST00000508235 MBD3L3A6NE82 208 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms