RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TBXA2RP21731 343 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 GSSP48637 474 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 TMED10P49755 219 aaKnown RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF136P52737 540 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 SNRPGP62308 76 aaKnown RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 EFR3AQ14156 821 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 SEC23BQ15437 767 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 MAPK14Q16539 360 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 CTU2Q2VPK5 515 aaKnown RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 KLHL26Q53HC5 615 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 PRAMEF17Q5VTA0 474 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 SLC27A4Q6P1M0 643 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 ISLR2Q6UXK2 745 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 NPSR1Q6W5P4 371 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 HSDL2Q6YN16 418 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 PRSS48Q7RTY5 328 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 ANKRD37Q7Z713 158 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 ZER1Q7Z7L7 766 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 HMGN2P46Q86SG4 172 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 MISPQ8IVT2 679 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 PRSS58Q8IYP2 241 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 STX19Q8N4C7 294 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 B3GNT7Q8NFL0 401 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 C9orf43Q8TAL5 461 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF420Q8TAQ5 688 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 TMEM239Q8WW34 195 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 TSLPQ969D9 159 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 VMP1Q96GC9 406 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 GAL3ST4Q96RP7 486 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 TSC22D3Q99576 134 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 DUSP21Q9H596 190 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 SLC25A19Q9HC21 320 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 APMAPQ9HDC9 416 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 CTPS2Q9NRF8 586 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 MAN2C1Q9NTJ4 1040 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 FBXO34Q9NWN3 711 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 CNOT2Q9NZN8 540 aaKnown RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 FOXJ2Q9P0K8 574 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 REV1Q9UBZ9 1251 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 RSL24D1Q9UHA3 163 aaKnown RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 RNF6Q9Y252 685 aa9.44□□□□□ -0.9
HDAC3-214ENST00000495485 RPL36Q9Y3U8 105 aaKnown RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 KMT2BQ9UMN6 2715 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-214ENST00000495485 NBEAQ8NFP9 2946 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NPIPB9F8W1W9 429 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 HRKO00198 91 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 FRS3O43559 492 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 EIF4E2O60573 245 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 SEMA7AO75326 666 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 UTS2O95399 124 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CLPSP04118 112 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 PNMTP11086 282 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 UBL4AP11441 157 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NAGAP17050 411 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 FMO3P31513 532 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 GIPRP48546 466 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NR0B1P51843 470 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CDH15P55291 814 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 RPS15P62841 145 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 PRKCDQ05655 676 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 PLCXD2Q0VAA5 305 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 EBPQ15125 230 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 OCLNQ16625 522 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 SLC25A30Q5SVS4 291 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 C12orf73Q69YU5 71 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 WBP2NLQ6ICG8 309 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 COX15Q7KZN9 410 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 PRICKLE2Q7Z3G6 844 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CPEB2Q7Z5Q1 589 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 MARCH9Q86YJ5 346 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 SPARTQ8N0X7 666 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 OR4N2Q8NGD1 307 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NUBPLQ8TB37 319 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 RORBQ92753 470 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NKD1Q969G9 470 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 ADIPOR1Q96A54 375 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 TMCO6Q96DC7 493 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CRELD1Q96HD1 420 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 IP6K3Q96PC2 410 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CTRCQ99895 268 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 WFDC6Q9BQY6 131 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 COPS4Q9BT78 406 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CRB3Q9BUF7 120 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NUDT9Q9BW91 350 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 POLDIP3Q9BY77 421 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 TBL1XR1Q9BZK7 514 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 SLC19A3Q9BZV2 496 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 SEMA4CQ9C0C4 833 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 WWTR1Q9GZV5 400 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 NXF5Q9H1B4 397 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 TBC1D23Q9NUY8 699 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 MED17Q9NVC6 651 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 DNAJB12Q9NXW2 375 aaKnown RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 H2AFY2Q9P0M6 372 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-214ENST00000495485 CTSFQ9UBX1 484 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 BAIAP2Q9UQB8 552 aa9.43□□□□□ -0.9
HDAC3-214ENST00000495485 DTX4Q9Y2E6 619 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms