RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ZNF836Q6ZNA1 936 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 VRK2Q86Y07 508 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 PTOV1Q86YD1 416 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF440Q8IYI8 595 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 BHLHE22Q8NFJ8 381 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ZPLD1Q8TCW7 415 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 TMEM234Q8WY98 164 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ST8SIA1Q92185 356 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 MRGPRX4Q96LA9 322 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 DMRTA2Q96SC8 542 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 GPATCH1Q9BRR8 931 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 DNAJB12Q9NXW2 375 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 CAMK2AQ9UQM7 478 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF443Q9Y2A4 671 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 SPTBN1Q01082 2364 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 PCNX1Q96RV3 2341 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 UTP20O75691 2785 aaKnown RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PRORSD1PA6NEY8 169 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 WIPF3A6NGB9 483 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 H3BML4 177 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 FAAHO00519 579 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 NDUFAB1O14561 156 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 BCAS1O75363 584 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 LDLRP01130 860 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PRKCAP17252 672 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PSMA4P25789 261 aaKnown RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 ELK4P28324 431 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PRKAR1BP31321 381 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 STARP49675 285 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 NUDT2P50583 147 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 GZMMP51124 257 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 DLX5P56178 289 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 CLDN18P56856 261 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 RAC1P63000 192 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 EEF1A1P68104 462 aaKnown RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PLAURQ03405 335 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 FOXF1Q12946 379 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 VEZF1Q14119 521 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 QPRTQ15274 297 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 TOMM34Q15785 309 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 VMACQ2NL98 169 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 SLC25A53Q5H9E4 307 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 C1orf185Q5T7R7 199 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 C8orf82Q6P1X6 216 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 ERICH5Q6P6B1 374 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 RPTNQ6XPR3 784 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 C3P1Q6ZMU1 363 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PATL1Q86TB9 770 aaKnown RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 CALHM3Q86XJ0 350 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 ZZZ3Q8IYH5 903 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 MEIOBQ8N635 442 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 FITM2Q8N6M3 262 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 OR5M1Q8NGP8 315 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 FBXO27Q8NI29 283 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF563Q8TA94 476 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 POC1BQ8TC44 478 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 BCAS4Q8TDM0 211 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 CNOT9Q92600 299 aaKnown RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 SLC35B4Q969S0 331 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 CCDC120Q96HB5 630 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 REXO5Q96IC2 774 aaKnown RBP9.78□□□□□ -0.84
ATG4B-219ENST00000479941 RNF145Q96MT1 663 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF583Q96ND8 569 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 KLHDC3Q9BQ90 382 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 FAM215AQ9Y5M1 114 aa9.78□□□□□ -0.84
ATG4B-219ENST00000479941 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 HEATR5AQ86XA9 2040 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 CFAP73A6NFT4 308 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 SHISA8B8ZZ34 492 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 H0Y3Z8 333 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 M0QX08 132 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 NTN1O95631 604 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 EPPINO95925 133 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 ME2P23368 584 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 AQP1P29972 269 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 RYKP34925 604 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 PCGF2P35227 344 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 APOBEC1P41238 236 aaKnown RBP9.77□□□□□ -0.85
ATG4B-219ENST00000479941 MNAT1P51948 309 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 SMSP52788 366 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 PCBP3P57721 371 aaKnown RBP9.77□□□□□ -0.85
ATG4B-219ENST00000479941 SESN3P58005 492 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 RPS3AP61247 264 aaKnown RBP9.77□□□□□ -0.85
ATG4B-219ENST00000479941 SRYQ05066 204 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 EPS8Q12929 822 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 KRT72Q14CN4 511 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 ACSF3Q4G176 576 aaPredicted RBP9.77□□□□□ -0.85
ATG4B-219ENST00000479941 NSUN5P2Q63ZY6 315 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 RTL6Q6ICC9 239 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 DHRS4L2Q6PKH6 230 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 CHMP1BQ7LBR1 199 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 ZNF550Q7Z398 422 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 ARMC8Q8IUR7 673 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 LACC1Q8IV20 430 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 SLC15A3Q8IY34 581 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 CLIP4Q8N3C7 705 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 RASSF5Q8WWW0 418 aa9.77□□□□□ -0.85
ATG4B-219ENST00000479941 NPAS1Q99742 590 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms