RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PRPHP41219 470 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 IFNAR2P48551 515 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 RGS4P49798 205 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 PPT1P50897 306 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 DIO3P55073 304 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 HSD17B7P56937 341 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 MXD4Q14582 209 aaPredicted RBP3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 TIGITQ495A1 244 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 CFAP221Q4G0U5 840 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 GALNT17Q6IS24 598 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 CXCL17Q6UXB2 119 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 VASH2Q86V25 355 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 PRR22Q8IZ63 422 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 DHRSXQ8N5I4 330 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 TRMT10AQ8TBZ6 339 aaKnown RBP3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 TCTEX1D2Q8WW35 142 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 SLC5A11Q8WWX8 675 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 BADQ92934 168 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 HAVCR1Q96D42 359 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 SH3YL1Q96HL8 342 aaPredicted RBP3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 ERP44Q9BS26 406 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 TUBGCP2Q9BSJ2 902 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 CNPY3Q9BT09 278 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 NAT10Q9H0A0 1025 aaKnown RBP3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 ZNF385DQ9H6B1 395 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 ELOVL3Q9HB03 270 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 PLLPQ9Y342 182 aa3.34□□□□□ -1.87
SMNDC1-205ENST00000477763 IGHV7-81A0A0B4J1V7 117 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 MBLAC1A4D2B0 266 aaPredicted RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 KLLNB2CW77 178 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 H0YCG3 227 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 K7EQM0 130 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 SULT2B1O00204 365 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 N4BP1O75113 896 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 LYPD3O95274 346 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 CA1P00915 261 aaPredicted RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 IGHV3-23P01764 117 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 SEMG1P04279 462 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 HSPB1P04792 205 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 RNH1P13489 461 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 PRG2P13727 222 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 CPN1P15169 458 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 HOXD10P28358 340 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 HPCAL1P37235 193 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 PLK1P53350 603 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 RPS8P62241 208 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 CHRNB3Q05901 458 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 AANATQ16613 207 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 KYAT1Q16773 422 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 RNF212Q495C1 297 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 GGTA1PQ4G0N0 100 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 CFAP157Q5JU67 520 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 ATAD3BQ5T9A4 648 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 TPRA1Q86W33 373 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 C11orf42Q8N5U0 333 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 KIR3DL3Q8N743 410 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 C14orf178Q8N769 122 aaPredicted RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 OR9A1PQ8NGU1 263 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 FAM3CQ92520 227 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 NEIL2Q969S2 332 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 CELF6Q96J87 481 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 NOL4LQ96MY1 436 aaPredicted RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 ZNF607Q96SK3 696 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 CHIAQ9BZP6 476 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 POLR1EQ9GZS1 481 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 SMYD3Q9H7B4 428 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 PTGES2Q9H7Z7 377 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 TBK1Q9UHD2 729 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 MRPS33Q9Y291 106 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 KIF25-AS1Q9Y6Z4 181 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 KDRP35968 1356 aa3.33□□□□□ -1.88
SMNDC1-205ENST00000477763 RS1O15537 224 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 HCN1O60741 890 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 ECI2O75521 394 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 LALBAP00709 142 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 OR8U8P0C7N1 319 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 IGLL1P15814 213 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 CYP2B6P20813 491 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 UQCRC2P22695 453 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 PAX7P23759 505 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 YWHABP31946 246 aaKnown RBP3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 CD80P33681 288 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 RIPPLY3P57055 190 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 ELAVL3Q14576 367 aaKnown RBP3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 ANKDD1AQ495B1 522 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 C9orf129Q5T035 196 aaKnown RBP3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 ATL3Q6DD88 541 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 TMEM225Q6GV28 225 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 PYHIN1Q6K0P9 492 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 FAM199XQ6PEV8 388 aaPredicted RBP3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 KCNIP4Q6PIL6 250 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 CCDC137Q6PK04 289 aaKnown RBP3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 HSD17B13Q7Z5P4 300 aaPredicted RBP3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 TMEM179BQ7Z7N9 219 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 MOB3BQ86TA1 216 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 PPP1R27Q86WC6 154 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 NRMQ8IXM6 262 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 ZNF683Q8IZ20 524 aa3.32□□□□□ -1.88
SMNDC1-205ENST00000477763 SLC38A6Q8IZM9 456 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms