RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CYTIPO60759 359 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ULK1O75385 1050 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 KCNK2O95069 426 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 NKX2-2O95096 273 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ACP2P11117 423 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 CD33P20138 364 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ENPP1P22413 925 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 CD40P25942 277 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 CFPP27918 469 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 EIF1P41567 113 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 NR4A2P43354 598 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 FABP6P51161 128 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF83P51522 516 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF117Q03924 483 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 C2orf80Q0P641 193 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 GGTLC2Q14390 218 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 RASA2Q15283 850 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 TRADDQ15628 312 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 TMEM176BQ3YBM2 270 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 VPS26BQ4G0F5 336 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF544Q6NX49 715 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC22A25Q6T423 547 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZDHHC24Q6UX98 284 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 GPRIN3Q6ZVF9 776 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 MISPQ8IVT2 679 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 RFLNBQ8N5W9 214 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF433Q8N7K0 673 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 CDRT4Q8N9R6 151 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 OR2W6PQ8NHA6 318 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 CDC26Q8NHZ8 85 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 FBXO30Q8TB52 745 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 FAM110BQ8TC76 370 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 METTL6Q8TCB7 284 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 GPR151Q8TDV0 419 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF75CPQ92670 426 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF524Q96C55 264 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 GIMAP5Q96F15 307 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 TMEM237Q96Q45 408 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 MRPL57Q9BQC6 102 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 MRPL46Q9H2W6 279 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 MYNNQ9NPC7 610 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 MIEF1Q9NQG6 463 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 UBQLN4Q9NRR5 601 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 SIRT5Q9NXA8 310 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 NTMQ9P121 344 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 MGAT4BQ9UQ53 548 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC25A15Q9Y619 301 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 SAR1BQ9Y6B6 198 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 A0A1W2PQD3 144 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ESYT3A0FGR9 886 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SERTM1A2A2V5 107 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF724A8MTY0 619 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 C9JVG2 144 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 NDUFS8O00217 210 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ETV2O00321 342 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SCDO00767 359 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF195O14628 629 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SMAD9O15198 467 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 TCF21O43680 179 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 RAD51DO75771 328 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SUPT7LO94864 414 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 PRPS2P11908 318 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 APEHP13798 732 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 HPGDP15428 266 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 PRKCAP17252 672 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ITGA2P17301 1181 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 PTAFRP25105 342 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 HMOX2P30519 316 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC7A1P30825 629 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 LCN1P31025 176 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 PAFAH1B1P43034 410 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 PDLIM4P50479 330 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SUMO3P55854 103 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 RAC3P60763 192 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 CAV1Q03135 178 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 CHRNEQ04844 493 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 BTKQ06187 659 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 RASGEF1BQ0VAM2 473 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 HSPB3Q12988 150 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 LCP2Q13094 533 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SELENBP1Q13228 472 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 TOMM34Q15785 309 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 DUSP5Q16690 384 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 CR1LQ2VPA4 569 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 PDLIM3Q53GG5 364 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 UNC50Q53HI1 259 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ARL13AQ5H913 290 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 EXOSC6Q5RKV6 272 aaKnown RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF678Q5SXM1 525 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 KLHL17Q6TDP4 642 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 CBLN3Q6UW01 205 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF551Q7Z340 670 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 GALNT5Q7Z7M9 940 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 MMGT1Q8N4V1 131 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC16A11Q8NCK7 471 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 SPATA4Q8NEY3 305 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 OR6Y1Q8NGX8 325 aa4.5□□□□□ -1.69
SNRNP40-204ENST00000474025 OR52N5Q8NH56 324 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms