RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ARL8AQ96BM9 186 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 L2HGDHQ9H9P8 463 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 KLHL9Q9P2J3 617 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 EIF4E2O60573 245 aaKnown RBP20.22■□□□□ 0.83
USP42-205ENST00000465073 C6orf47O95873 294 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 PRPS1L1P21108 318 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 ENPP1P22413 925 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 PTGR1Q14914 329 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 CLEC12BQ2HXU8 276 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 NDUFAF6Q330K2 333 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 C6orf136Q5SQH8 315 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 BHLHB9Q6PI77 547 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 ZNF614Q8N883 585 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 TOR1AIP2Q8NFQ8 470 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 PIWIL2Q8TC59 973 aaKnown RBP20.22■□□□□ 0.83
USP42-205ENST00000465073 POTEKPQ9BYX7 375 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 BCO1Q9HAY6 547 aa20.22■□□□□ 0.83
USP42-205ENST00000465073 ZNF814B7Z6K7 855 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 ETV2O00321 342 aaPredicted RBP20.21■□□□□ 0.83
USP42-205ENST00000465073 ZNF264O43296 627 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 SLU7O95391 586 aaKnown RBP20.21■□□□□ 0.83
USP42-205ENST00000465073 FESP07332 822 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 SOD3P08294 240 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 DANCRP0C864 163 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 IL23RQ5VWK5 629 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 DNAJC14Q6Y2X3 702 aaPredicted RBP20.21■□□□□ 0.83
USP42-205ENST00000465073 Q6ZT83 130 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 ZNF619Q8N2I2 560 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 LRRN4CLQ8ND94 238 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 RFWD2Q8NHY2 731 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 AGR3Q8TD06 166 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 SMAP2Q8WU79 429 aaPredicted RBP20.21■□□□□ 0.83
USP42-205ENST00000465073 GTPBP3Q969Y2 492 aaKnown RBP20.21■□□□□ 0.83
USP42-205ENST00000465073 OR7D2Q96RA2 312 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 C1orf50Q9BV19 199 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 ANKZF1Q9H8Y5 726 aa20.21■□□□□ 0.83
USP42-205ENST00000465073 TLDC2A0PJX2 215 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 CFLARO15519 480 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 UBL4AP11441 157 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 IDUAP35475 653 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 CBFBQ13951 182 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 VEZF1Q14119 521 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 QPRTQ15274 297 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 ZNF672Q499Z4 452 aaPredicted RBP20.2■□□□□ 0.82
USP42-205ENST00000465073 BHLHA15Q7RTS1 189 aaPredicted RBP20.2■□□□□ 0.82
USP42-205ENST00000465073 RIMKLAQ8IXN7 391 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 KRTCAP2Q8N6L1 136 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 TMCO5AQ8N6Q1 288 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 FNDC5Q8NAU1 212 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.2■□□□□ 0.82
USP42-205ENST00000465073 ZNF524Q96C55 264 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 C3orf30Q96M34 536 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 SDF2Q99470 211 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 PSD2Q9BQI7 771 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 MECRQ9BV79 373 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 BHLHE41Q9C0J9 482 aaPredicted RBP20.2■□□□□ 0.82
USP42-205ENST00000465073 NMUR2Q9GZQ4 415 aa20.2■□□□□ 0.82
USP42-205ENST00000465073 IGHV3-15A0A0B4J1V0 119 aa20.19■□□□□ 0.82
USP42-205ENST00000465073 SERPINB5P36952 375 aa20.19■□□□□ 0.82
USP42-205ENST00000465073 OR3A2P47893 321 aa20.19■□□□□ 0.82
USP42-205ENST00000465073 SLC17A7Q9P2U7 560 aa20.19■□□□□ 0.82
USP42-205ENST00000465073 ING1Q9UK53 422 aaPredicted RBP20.19■□□□□ 0.82
USP42-205ENST00000465073 A0A1W2PNR3 127 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 A0A1W2PP18 115 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 SERINC4A6NH21 518 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 DUXAA6NLW8 204 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ESPNB1AK53 854 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 RNF223E7ERA6 249 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 CRLF1O75462 422 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 CCR4P51679 360 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 BSPH1Q075Z2 132 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 KRTAP1-1Q07627 177 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 RASGEF1BQ0VAM2 473 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 C3orf33Q6P1S2 294 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 SEZ6L2Q6UXD5 910 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ZCCHC23Q6ZST2 131 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 SSX8Q7RTT4 187 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 RIBC1Q8N443 379 aaPredicted RBP20.18■□□□□ 0.82
USP42-205ENST00000465073 NEUROG1Q92886 237 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 DUSP26Q9BV47 211 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 REG4Q9BYZ8 158 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 LAT2Q9GZY6 243 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ADAM21Q9UKJ8 722 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 LIPT1Q9Y234 373 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 FREM1Q5H8C1 2179 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ATRQ13535 2644 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 DPRXA6NFQ7 191 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ZNF724A8MTY0 619 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 CYTIPO60759 359 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 DNAJA2O60884 412 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 AK1P00568 194 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 HBA1P69905 142 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 PDZK1Q5T2W1 519 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 HEPHL1Q6MZM0 1159 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ATG4DQ86TL0 474 aaPredicted RBP20.18■□□□□ 0.82
USP42-205ENST00000465073 OR5D16Q8NGK9 328 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 OR5AK3PQ8NH89 298 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 ST8SIA1Q92185 356 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 OR5B2Q96R09 309 aa20.18■□□□□ 0.82
USP42-205ENST00000465073 THUMPD3Q9BV44 507 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms