RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 IGSF21Q96ID5 467 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 C20orf24Q9BUV8 137 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 OR52D1Q9H346 318 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 ZNF443Q9Y2A4 671 aaPredicted RBP11.31□□□□□ -0.6
UBR4-205ENST00000417040 MYH1P12882 1939 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
UBR4-205ENST00000417040 H7C1C5 153 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 HMGN2P05204 90 aaKnown RBP11.31□□□□□ -0.6
UBR4-205ENST00000417040 PPT1P50897 306 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 LCN6P62502 163 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 PEA15Q15121 130 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 OR7A5Q15622 319 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 ADPRMQ3LIE5 342 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 YIF1BQ5BJH7 314 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 PRSS45Q7RTY3 260 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
UBR4-205ENST00000417040 CADM3Q8N126 398 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 OR10K1Q8NGX5 313 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 FNDC9Q8TBE3 224 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 GPR148Q8TDV2 347 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 RSC1A1Q92681 617 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 OR7D2Q96RA2 312 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 TREX1Q9NSU2 369 aa11.31□□□□□ -0.6
UBR4-205ENST00000417040 RAC2P15153 192 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 DEFA6Q01524 100 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 SLC22A6Q4U2R8 563 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 GDPGP1Q6ZNW5 385 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 HSD11B1LQ7Z5J1 315 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 UEVLDQ8IX04 471 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR13F1Q8NGS4 319 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 MS4A4EQ96PG1 132 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 UNKLQ9H9P5 680 aaKnown RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 C19orf25Q9UFG5 118 aaPredicted RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 GABRQQ9UN88 632 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 MED1Q15648 1581 aaPredicted RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 PIM1P11309 404 aaPredicted RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 PER3P56645 1201 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR51Q1Q8NH59 317 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 PRRC1Q96M27 445 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 SYT11Q9BT88 431 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 CLEC2DQ9UHP7 191 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 LILRB5O75023 590 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 PPP3CBP16298 524 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 PRKAR1BP31321 381 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 NDUFA6P56556 154 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 RNF4P78317 190 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ERV3-1Q14264 604 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ARSJQ5FYB0 599 aaPredicted RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 ARGFXA6NJG6 315 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 SCO1O75880 301 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 EDN3P14138 238 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OMGP23515 440 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 HBA1P69905 142 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 CYCSP99999 105 aaKnown RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 TLE3Q04726 772 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ZNF91Q05481 1191 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 RING1Q06587 406 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 MALLQ13021 153 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 VEZF1Q14119 521 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 TBCEQ15813 527 aaPredicted RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 SLC5A12Q1EHB4 618 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 KIAA0319Q5VV43 1072 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ZNF836Q6ZNA1 936 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 SVBPQ8N300 66 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR13C2Q8NGS9 318 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR2A12Q8NGT7 310 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 GPR150Q8NGU9 434 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ADAMTS16Q8TE57 1224 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR2M2Q96R28 347 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 LTB4R2Q9NPC1 389 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 WASH6PQ9NQA3 447 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 CIB4A0PJX0 185 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 KDM4EB2RXH2 506 aaPredicted RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 RFXAPO00287 272 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 IL32P24001 234 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 XCR1P46094 333 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR5M10Q6IEU7 315 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR52R1Q8NGF1 315 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 FOXJ1Q92949 421 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 OR5B2Q96R09 309 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 MVB12BQ9H7P6 319 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 BABAM2Q9NXR7 383 aa11.3□□□□□ -0.6
UBR4-205ENST00000417040 PHRF1Q9P1Y6 1649 aaKnown RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
UBR4-205ENST00000417040 PTGESO14684 152 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
UBR4-205ENST00000417040 CCR7P32248 378 aa11.29□□□□□ -0.6
UBR4-205ENST00000417040 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms