RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 EIF1AXP47813 144 aaKnown RBP17.29■□□□□ 0.36
SYNE4-202ENST00000340477 CLDN20P56880 219 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 SELENBP1Q13228 472 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 MMEL1Q495T6 779 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 PRAMEF8Q5VWM4 474 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 PRAMEF7Q5VXH5 474 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 HIST2H2BCQ6DN03 193 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 HMGN2P46Q86SG4 172 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 ADGRE4PQ86SQ3 457 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 ZNF440Q8IYI8 595 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 DPP10Q8N608 796 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 METTL25Q8N6Q8 603 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 C9orf106Q8NAJ2 232 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 FAM71CQ8NEG0 241 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 BBS10Q8TAM1 723 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 KLHL15Q96M94 604 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 ZNF317Q96PQ6 595 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-202ENST00000340477 TREX2Q9BQ50 279 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-202ENST00000340477 SFXN3Q9BWM7 321 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 PRRG4Q9BZD6 226 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 UCK2Q9BZX2 261 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 TMEM185BQ9H7F4 350 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 TIGARQ9NQ88 270 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 SERINC1Q9NRX5 453 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 SLC25A37Q9NYZ2 338 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 VAPAQ9P0L0 249 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 SLAMF8Q9P0V8 285 aa17.29■□□□□ 0.36
SYNE4-202ENST00000340477 MCTS1Q9ULC4 181 aaKnown RBP17.29■□□□□ 0.36
SYNE4-202ENST00000340477 HEATR5AQ86XA9 2040 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 KDM4EB2RXH2 506 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-202ENST00000340477 TOXO94900 526 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 RCBTB2O95199 551 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 SYNGR4O95473 234 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 BMP2P12643 396 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 NID1P14543 1247 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 RPS4Y1P22090 263 aaKnown RBP17.28■□□□□ 0.36
SYNE4-202ENST00000340477 CLDN15P56746 228 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 GGNQ86UU5 652 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 MSRB3Q8IXL7 192 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 LILRA2Q8N149 483 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 OR52P1PQ8NH57 321 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 OR2V1Q8NHB1 315 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 POC1BQ8TC44 478 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 IFT52Q9Y366 437 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 SPIN1Q9Y657 262 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-202ENST00000340477 CAPN7Q9Y6W3 813 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 KIAA1549Q9HCM3 1950 aa17.28■□□□□ 0.36
SYNE4-202ENST00000340477 DSPPQ9NZW4 1301 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 TRBV5-3A0A0A0MS03 114 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 BBIP1A8MTZ0 92 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 SLC22A2O15244 555 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 IL18BPO95998 194 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 THBS1P07996 1170 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 PSMA4P25789 261 aaKnown RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 ADSLP30566 484 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 SLC7A1P30825 629 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 RYKP34925 604 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 SFTPDP35247 375 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 ASCL1P50553 236 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 ZNF136P52737 540 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 SUCLG1P53597 346 aaKnown RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 MERTKQ12866 999 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 PON3Q15166 354 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 TOMM34Q15785 309 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 CYP51A1Q16850 503 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 SLC25A53Q5H9E4 307 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 RPS26P11Q5JNZ5 115 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 MRPL2Q5T653 305 aaKnown RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 HBMQ6B0K9 141 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 ZNF787Q6DD87 383 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 C3orf33Q6P1S2 294 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 KRT73Q86Y46 540 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 NAXEQ8NCW5 288 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 OR10D3Q8NH80 312 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 MAL2Q969L2 176 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 INTS12Q96CB8 462 aaKnown RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 ZG16BQ96DA0 208 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 REXO5Q96IC2 774 aaKnown RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 CGREF1Q99674 301 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 SAR1AQ9NR31 198 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 ZNF443Q9Y2A4 671 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-202ENST00000340477 GMEB1Q9Y692 573 aa17.27■□□□□ 0.36
SYNE4-202ENST00000340477 EEF1E1-BLOC1S5C9J1V9 151 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 H0YC42 278 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 TNFSF11O14788 317 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 EEF1E1O43324 174 aaKnown RBP17.26■□□□□ 0.35
SYNE4-202ENST00000340477 CCDC22O60826 627 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 CRHP06850 196 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 ARAFP10398 606 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 SLC6A2P23975 617 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 TPD52P55327 224 aaPredicted RBP17.26■□□□□ 0.35
SYNE4-202ENST00000340477 CDK6Q00534 326 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 KLF10Q13118 480 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 CYLC2Q14093 348 aaPredicted RBP17.26■□□□□ 0.35
SYNE4-202ENST00000340477 TRMT5Q32P41 509 aaKnown RBP17.26■□□□□ 0.35
SYNE4-202ENST00000340477 COQ5Q5HYK3 327 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 REEP3Q6NUK4 255 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 DLEU7Q6UYE1 221 aa17.26■□□□□ 0.35
SYNE4-202ENST00000340477 SPATA21Q7Z572 469 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms