RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KLHL12Q53G59 568 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 TRMT12Q53H54 448 aaKnown RBP8.06□□□□□ -1.12
CLK1-201ENST00000321356 BCL2L15Q5TBC7 163 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 FAM205BPQ63HN1 556 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 FBXO42Q6P3S6 717 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 VITQ6UXI7 678 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 SLC44A3Q8N4M1 653 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 MS4A15Q8N5U1 240 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 OR13C2Q8NGS9 318 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 TRMT10AQ8TBZ6 339 aaKnown RBP8.06□□□□□ -1.12
CLK1-201ENST00000321356 LCN9Q8WX39 176 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 PMM1Q92871 262 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 FGF13Q92913 245 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 COL26A1Q96A83 441 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 FAM131CQ96AQ9 280 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 C4orf36Q96KX1 117 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 GPR137Q96N19 417 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 OR2A5Q96R48 311 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 MFRPQ9BY79 579 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 FGF22Q9HCT0 170 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 EMC7Q9NPA0 242 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 MEPEQ9NQ76 525 aaPredicted RBP8.06□□□□□ -1.12
CLK1-201ENST00000321356 SLCO1C1Q9NYB5 712 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 ST6GALNAC2Q9UJ37 374 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 DAPP1Q9UN19 280 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 SLC22A7Q9Y694 548 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 RNF215Q9Y6U7 377 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 COLEC10Q9Y6Z7 277 aa8.06□□□□□ -1.12
CLK1-201ENST00000321356 A0A1W2PQU0 124 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 LINC01553A4QN01 128 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 RIIAD1A6NNX1 92 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 PEX12O00623 359 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 P2RX6O15547 441 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 TNFSF14O43557 240 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 FZD7O75084 574 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 DNAJB6O75190 326 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 RFPL3O75679 317 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 EML2O95834 649 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ATP1B1P05026 303 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 IFI6P09912 130 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 LAMP2P13473 410 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 BMP8BP34820 402 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 MMP15P51511 669 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 NRG3P56975 720 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ACTC1P68032 377 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ACTA1P68133 377 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 SIM1P81133 766 aaPredicted RBP8.05□□□□□ -1.12
CLK1-201ENST00000321356 SLC3A1Q07837 685 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 DBPQ10586 325 aaPredicted RBP8.05□□□□□ -1.12
CLK1-201ENST00000321356 SGCGQ13326 291 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 FHL1Q13642 323 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 RUNX3Q13761 415 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 CRMP1Q14194 572 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 SUZ12Q15022 739 aaKnown RBP8.05□□□□□ -1.12
CLK1-201ENST00000321356 CCDC85BQ15834 202 aaPredicted RBP8.05□□□□□ -1.12
CLK1-201ENST00000321356 SLC25A35Q3KQZ1 300 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ACSM3Q53FZ2 586 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 CD276Q5ZPR3 534 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ANKRD54Q6NXT1 300 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ZNF613Q6PF04 617 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 BMP8AQ7Z5Y6 402 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 OR4N5Q8IXE1 308 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 FAM109AQ8N4B1 249 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 BMPERQ8N8U9 685 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 CDRT4Q8N9R6 151 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 OR4E2Q8NGC2 313 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 OR11H7Q8NGC8 314 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 YIPF5Q969M3 257 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 PAWRQ96IZ0 340 aaKnown RBP8.05□□□□□ -1.12
CLK1-201ENST00000321356 OR2M2Q96R28 347 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 STACQ99469 402 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 APOOQ9BUR5 198 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ZNF426Q9BUY5 554 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 IFT27Q9BW83 186 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 SLC17A9Q9BYT1 436 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 MED28Q9H204 178 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 DPAGT1Q9H3H5 408 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 DIABLOQ9NR28 239 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 TMEM74BQ9NUR3 256 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 NUDT15Q9NV35 164 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 FBXO34Q9NWN3 711 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 B3GNT2Q9NY97 397 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 PTTG3PQ9NZH4 202 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 TBC1D29Q9UFV1 150 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 SLC23A1Q9UHI7 598 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 BAIAP2Q9UQB8 552 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 MED31Q9Y3C7 131 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 NUBP2Q9Y5Y2 271 aa8.05□□□□□ -1.12
CLK1-201ENST00000321356 A0A1B0GVC2 190 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 A6NIN4 97 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 J3QLW9 94 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OGG1O15527 345 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PLRG1O43660 514 aaKnown RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 B3GALT2O43825 422 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 CTSVO60911 334 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 UBL3O95164 117 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 AK1P00568 194 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 TCRBP04435 133 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 MRPL3P09001 348 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms