RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZNF385BQ569K4 471 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 OR13C2Q8NGS9 318 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 KIAA1143Q96AT1 154 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 DIMT1Q9UNQ2 313 aaKnown RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ERP29P30040 261 aaKnown RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ZNF81P51508 661 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 PDX1P52945 283 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 LILRA6Q6PI73 481 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 NCCRP1Q6ZVX7 275 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ZNF784Q8NCA9 323 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ZNF417Q8TAU3 575 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ZNF578Q96N58 590 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 IL33O95760 270 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 GABRA5P31644 462 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 TPMTP51580 245 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 INIPQ9NRY2 104 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 C13orf42A0A1B0GVH6 325 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 TEX46H3BTG2 121 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ZNF43P17038 809 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 GLO1Q04760 184 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 DLX2Q07687 328 aaPredicted RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 NR0B2Q15466 257 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 OR13H1Q8NG92 308 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 ZFPM2Q8WW38 1151 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 INTS14Q96SY0 518 aa15.6■□□□□ 0.09
PHRF1-201ENST00000264555 AK6Q9Y3D8 172 aaKnown RBP15.6■□□□□ 0.09
PHRF1-201ENST00000264555 M0R233 179 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 CCNOP22674 350 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 FPR3P25089 353 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 EPHA5P54756 1037 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 MAT1AQ00266 395 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 RIPPLY1Q0D2K3 151 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 LYSMD4Q5XG99 296 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 GPR139Q6DWJ6 353 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 LYRM4Q9HD34 91 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 C1GALT1Q9NS00 363 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 PAQR5Q9NXK6 330 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 TBC1D29Q9UFV1 150 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 TEX13DA0A0J9YY54 714 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 P04436 131 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SNRPGP62308 76 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 GALK2Q01415 458 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SHHQ15465 462 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 KCTD9Q7L273 389 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SGCDQ92629 289 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 FAM46BQ96A09 425 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 MCOLN1Q9GZU1 580 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 ACER3Q9NUN7 267 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 NDRG4Q9ULP0 352 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 MCM3APO60318 1980 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 GLP1RP43220 463 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 LIM2P55344 173 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 RPS15P62841 145 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 EIF2B1Q14232 305 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 EIF5AL1Q6IS14 154 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 ALG14Q96F25 216 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 TMEM246Q9BRR3 403 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SIDT1Q9NXL6 827 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 CTDSP2O14595 271 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SLC1A3P43003 542 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 MRPL19P49406 292 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 PLP2Q04941 152 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SF3A2Q15428 464 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 TBC1D25Q3MII6 688 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 PLK5Q496M5 336 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 NXNL2Q5VZ03 156 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 THOC7Q6I9Y2 204 aaKnown RBP15.59■□□□□ 0.09
PHRF1-201ENST00000264555 SPERTQ8NA61 448 aa15.59■□□□□ 0.09
PHRF1-201ENST00000264555 GDF7Q7Z4P5 450 aa15.58■□□□□ 0.09
PHRF1-201ENST00000264555 SLC16A11Q8NCK7 471 aa15.58■□□□□ 0.09
PHRF1-201ENST00000264555 CASTOR1Q8WTX7 329 aa15.58■□□□□ 0.09
PHRF1-201ENST00000264555 WASH6PQ9NQA3 447 aa15.58■□□□□ 0.09
PHRF1-201ENST00000264555 ATXN7L1Q9ULK2 861 aaPredicted RBP15.58■□□□□ 0.09
PHRF1-201ENST00000264555 KIAA0100Q14667 2235 aaKnown RBP15.58■□□□□ 0.09
PHRF1-201ENST00000264555 IGLV3-16A0A075B6K0 115 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 HMGN4O00479 90 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 CREBL2O60519 120 aaPredicted RBP15.58■□□□□ 0.08
PHRF1-201ENST00000264555 FOSL2P15408 326 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 DNASE1P24855 282 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 OR1D4P47884 311 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 IRF2BPLQ9H1B7 796 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 MRPL15Q9P015 296 aaKnown RBP15.58■□□□□ 0.08
PHRF1-201ENST00000264555 MAB21L2Q9Y586 359 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 OR2A25A4D2G3 310 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF264O43296 627 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 SFRP4Q6FHJ7 346 aaPredicted RBP15.58■□□□□ 0.08
PHRF1-201ENST00000264555 SHROOM3Q8TF72 1996 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 SERINC4A6NH21 518 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 TMPRSS11DO60235 418 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ETHE1O95571 254 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ACTBP60709 375 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ACTG1P63261 375 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF322Q6U7Q0 402 aaPredicted RBP15.58■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF704Q6ZNC4 412 aaPredicted RBP15.58■□□□□ 0.08
PHRF1-201ENST00000264555 SHISA6Q6ZSJ9 500 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 TPRA1Q86W33 373 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 OR14A16Q8NHC5 309 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 SUN5Q8TC36 379 aa15.58■□□□□ 0.08
PHRF1-201ENST00000264555 OR10A5Q9H207 317 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms