RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 DNAJA3Q96EY1 480 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 ZNF845Q96IR2 970 aaPredicted RBP9.97□□□□□ -0.81
DDB1-222ENST00000543627 ZNF350Q9GZX5 532 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 PAIP1Q9H074 479 aaKnown RBP9.97□□□□□ -0.81
DDB1-222ENST00000543627 RUBCNLQ9H714 662 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 P2RX2Q9UBL9 471 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 KCNE5Q9UJ90 142 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 LIPT1Q9Y234 373 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 AP4B1Q9Y6B7 739 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 PHF3Q92576 2039 aaKnown RBP9.97□□□□□ -0.81
DDB1-222ENST00000543627 CD8B2A6NJW9 211 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 SLC22A20A6NK97 555 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 LINC01387J3KSC0 135 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 ANGPT2O15123 496 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 HNRNPRO43390 633 aaKnown RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 CXCL13O43927 109 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 KIAA0513O60268 411 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 EIF4E2O60573 245 aaKnown RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 SMNDC1O75940 238 aaKnown RBP eCLIP9.96□□□□□ -0.82
DDB1-222ENST00000543627 SYNGR4O95473 234 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 TGM6O95932 706 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 NUDT7P0C024 238 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 IL11P20809 199 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 CTSSP25774 331 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 TIMP3P35625 211 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 MDH1P40925 334 aaKnown RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 ATP4BP51164 291 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 ZNF136P52737 540 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 KCNJ10P78508 379 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 FOXF2Q12947 444 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 GNA13Q14344 377 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 PON3Q15166 354 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 ZNF141Q15928 474 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 BCL2A1Q16548 175 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 TMEM176BQ3YBM2 270 aaPredicted RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 RPS26P11Q5JNZ5 115 aaPredicted RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 LRRC74BQ6ZQY2 392 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 LUZP2Q86TE4 346 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 PEX5LQ8IYB4 626 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 LILRA2Q8N149 483 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 OR5W2Q8NH69 310 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 POC1BQ8TC44 478 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 GPR119Q8TDV5 335 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 WDR60Q8WVS4 1066 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 FIG4Q92562 907 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 MAL2Q969L2 176 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 TRNT1Q96Q11 434 aaKnown RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 TM9SF2Q99805 663 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 SIKE1Q9BRV8 207 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 NMUR2Q9GZQ4 415 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 LAT2Q9GZY6 243 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 FAM107BQ9H098 131 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 RAD21L1Q9H4I0 556 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 MTHFD2LQ9H903 347 aaPredicted RBP9.96□□□□□ -0.82
DDB1-222ENST00000543627 NDUFAF1Q9Y375 327 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 L3MBTL1Q9Y468 752 aa9.96□□□□□ -0.82
DDB1-222ENST00000543627 DOPEY1Q5JWR5 2465 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 A0A096LPI6 279 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 EVPLLA8MZ36 301 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 NPIPB9F8W1W9 429 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 ATP8B1O43520 1251 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 BCAS1O75363 584 aaPredicted RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 PLGP00747 810 aaPredicted RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 LINGO3P0C6S8 592 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 ZCCHC18P0CG32 403 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 TFPIP10646 304 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 PGCP20142 388 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 CEACAM8P31997 349 aaPredicted RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 OPRM1P35372 400 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 EIF1P41567 113 aaKnown RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 CPA2P48052 419 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 CRISP3P54108 245 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 MERTKQ12866 999 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 NFYCQ13952 458 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 FGFBP1Q14512 234 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 RGNQ15493 299 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 MMEL1Q495T6 779 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 PDSS1Q5T2R2 415 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 HBMQ6B0K9 141 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 VRK2Q86Y07 508 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 MCEMP1Q8IX19 187 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 GTPBP8Q8N3Z3 284 aaPredicted RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 OR52P1PQ8NH57 321 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 FNDC9Q8TBE3 224 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 CNOT9Q92600 299 aaKnown RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 OSTF1Q92882 214 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 WNT2BQ93097 391 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 LRRC46Q96FV0 321 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 TMEM19Q96HH6 336 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 TRIM8Q9BZR9 551 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 SLC38A1Q9H2H9 487 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 POLE3Q9NRF9 147 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 LEF1Q9UJU2 399 aaPredicted RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 ICAM5Q9UMF0 924 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 CLEC4AQ9UMR7 237 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 ZNF232Q9UNY5 417 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 SLC35A3Q9Y2D2 325 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 GPC6Q9Y625 555 aaPredicted RBP9.95□□□□□ -0.82
DDB1-222ENST00000543627 KIAA1549Q9HCM3 1950 aa9.95□□□□□ -0.82
DDB1-222ENST00000543627 NCOA6Q14686 2063 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms