RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 OXA1LQ15070 435 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 C14orf28Q4W4Y0 310 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 CT45A2Q5DJT8 189 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 PRAMEF17Q5VTA0 474 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 RNF113BQ8IZP6 322 aaKnown RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 PARP16Q8N5Y8 322 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 OR52L1Q8NGH7 329 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 RNF31Q96EP0 1072 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 TM9SF2Q99805 663 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 BARHL1Q9BZE3 327 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 OR10A5Q9H207 317 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 DNAJB12Q9NXW2 375 aaKnown RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 A0A0B4J2E0 115 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 A0A1B0GX12 115 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 IRGMA1A4Y4 181 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 GTF2E2P29084 291 aaKnown RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 SLC1A3P43003 542 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 OR1D4P47884 311 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 IGLV3-21P80748 117 aaPredicted RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 C22orf42Q6IC83 251 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 TTLL10Q6ZVT0 673 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 CXXC5Q7LFL8 322 aaKnown RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 C17orf82Q86X59 251 aaPredicted RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 CLDN22Q8N7P3 220 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 OR4C3Q8NH37 302 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 BRIX1Q8TDN6 353 aaKnown RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 C1GALT1C1Q96EU7 318 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 AHCYL2Q96HN2 611 aaKnown RBP15.07■□□□□ 0
COL4A1-204ENST00000543140 ZNF285Q96NJ3 590 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 LMF1Q96S06 567 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 IFT27Q9BW83 186 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 HCAR1Q9BXC0 346 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 Q9N2J8 555 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 RP1P56715 2156 aa15.07■□□□□ 0
COL4A1-204ENST00000543140 TMEM129A0AVI4 362 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 SMIM30A4D0T7 59 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 BHLHE40O14503 412 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 PRAMEF2O60811 474 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 RAB15P59190 212 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 RPS25P62851 125 aaKnown RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 CSTF1Q05048 431 aaKnown RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 ZNF791Q3KP31 576 aaPredicted RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 NXNL2Q5VZ03 156 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 ZNF613Q6PF04 617 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 BMP8AQ7Z5Y6 402 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 GATAD2AQ86YP4 633 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 FAM83FQ8NEG4 500 aaPredicted RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 OR51G2Q8NGK0 314 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 C1orf216Q8TAB5 229 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 PMM1Q92871 262 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 MED17Q9NVC6 651 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 TXNL4BQ9NX01 149 aaKnown RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 CAB39Q9Y376 341 aaPredicted RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 EXOSC1Q9Y3B2 195 aaKnown RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 PEX16Q9Y5Y5 336 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 A8MUA0 341 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 ZNF670-ZNF695F2Z2N8 137 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 HYAL3O43820 417 aaPredicted RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 LALBAP00709 142 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 NGFRP08138 427 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 HTR1FP30939 366 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 ALG10BQ5I7T1 473 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 SIRT6Q8N6T7 355 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 Q8N9G6 341 aaPredicted RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 HLA-CQ95604 372 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 SECISBP2Q96T21 854 aaKnown RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 C14orf105Q9NVL8 296 aa15.06■□□□□ 0
COL4A1-204ENST00000543140 TP53BP1Q12888 1972 aaPredicted RBP15.06■□□□□ 0
COL4A1-204ENST00000543140 RGS5O15539 181 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 CHP2O43745 196 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 UPK1BO75841 260 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 CDRT1O95170 752 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 COL13A1Q5TAT6 717 aaPredicted RBP15.05■□□□□ 0
COL4A1-204ENST00000543140 GDPGP1Q6ZNW5 385 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 TMPRSS11FQ6ZWK6 438 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 ZNF554Q86TJ5 538 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 SLC22A16Q86VW1 577 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 BCORP1Q8N888 145 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 ZNF321PQ8N8H1 164 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 ZDHHC12Q96GR4 267 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 PRO3102Q9H379 93 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 PNO1Q9NRX1 252 aaKnown RBP15.05■□□□□ 0
COL4A1-204ENST00000543140 DHCR7Q9UBM7 475 aaKnown RBP15.05■□□□□ 0
COL4A1-204ENST00000543140 SIGLEC7Q9Y286 467 aa15.05■□□□□ 0
COL4A1-204ENST00000543140 ARID1BQ8NFD5 2236 aaPredicted RBP15.05■□□□□ -0
COL4A1-204ENST00000543140 A8MU76 341 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 TAF4O00268 1085 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 PIAS2O75928 621 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 OR2B3O76000 313 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 BCAP31P51572 246 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 SLC16A1P53985 500 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 HSD17B7P56937 341 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 KLHL12Q53G59 568 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 TCTE1Q5JU00 501 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 GARNL3Q5VVW2 1013 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 NIPAL1Q6NVV3 410 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 OGFOD3Q6PK18 319 aa15.05■□□□□ -0
COL4A1-204ENST00000543140 GATSQ8NAP1 163 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms