RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SOD2P04179 222 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 DRD5P21918 477 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 GABRR2P28476 465 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 CALCRP30988 508 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 CCR9P51686 369 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 RAP2BP61225 183 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 TGM3Q08188 693 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 B3GNTL1Q67FW5 361 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-205ENST00000539661 OR4C11Q6IEV9 310 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 UBE3DQ7Z6J8 389 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 VRK2Q86Y07 508 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 OR6V1Q8N148 313 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 OR10H4Q8NGA5 316 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 MOSPD2Q8NHP6 518 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 RIT1Q92963 219 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 KISS1RQ969F8 398 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-205ENST00000539661 TBX5Q99593 518 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 PCBD2Q9H0N5 130 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 OR2AG1Q9H205 316 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 TAC3Q9UHF0 121 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 PFDN2Q9UHV9 154 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 CHD9Q3L8U1 2897 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 E9PI62 339 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 LEFTY2O00292 366 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 MAN2B1O00754 1011 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 NTN1O95631 604 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 EPXP11678 715 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 ATF1P18846 271 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 RGS8P57771 180 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-205ENST00000539661 AP3S2P59780 193 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 CTAG1AP78358 180 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 E2F1Q01094 437 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 C6orf132Q5T0Z8 1188 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 DMKNQ6E0U4 476 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-205ENST00000539661 DCUN1D3Q8IWE4 304 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 EID2Q8N6I1 236 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 GANCQ8TET4 914 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 KLK6Q92876 244 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 PTP4A1Q93096 173 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 ASF1AQ9Y294 204 aa16.37■□□□□ 0.21
RAB40C-205ENST00000539661 ALDOBP05062 364 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 SNRPBP14678 240 aaKnown RBP16.36■□□□□ 0.21
RAB40C-205ENST00000539661 CXCL2P19875 107 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 HSD17B2P37059 387 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 TPMTP51580 245 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 FAM46CQ5VWP2 391 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 OR52L1Q8NGH7 329 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 OR52H1Q8NGJ2 320 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 OR2L2Q8NH16 312 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 THAP4Q8WY91 577 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 ELMOD3Q96FG2 381 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 DTD2Q96FN9 168 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 MCHR1Q99705 422 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 FBXL3Q9UKT7 428 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 ZMIZ1Q9ULJ6 1067 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 RFXAPO00287 272 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 FLRT2O43155 660 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 NMBP08949 121 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 NFYAP23511 347 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-205ENST00000539661 PRR5P85299 388 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 UBE2NLQ5JXB2 153 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 Q6ZTK2 550 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 C2orf73Q8N5S3 287 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-205ENST00000539661 LRIG1Q96JA1 1093 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 OR7D2Q96RA2 312 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 BRD7Q9NPI1 651 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 PIPOXQ9P0Z9 390 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 IL36AQ9UHA7 158 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 IL20RAQ9UHF4 553 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 PLAGL1Q9UM63 463 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 GPR34Q9UPC5 381 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 DENND4CQ5VZ89 1909 aa16.36■□□□□ 0.21
RAB40C-205ENST00000539661 A0A1B0GTQ1 180 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 UNC119BA6NIH7 251 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 CDC42EP2O14613 210 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 POP7O75817 140 aaKnown RBP16.35■□□□□ 0.21
RAB40C-205ENST00000539661 ARL6IP5O75915 188 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 THY1P04216 161 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 ZGLP1P0C6A0 271 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 IFNGR1P15260 489 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 GAREM2Q75VX8 874 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 C17orf47Q8NEP4 570 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 SCARB1Q8WTV0 552 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 TMEM255BQ8WV15 326 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 SARGQ9BW04 601 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 OR52A5Q9H2C5 316 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 OR52D1Q9H346 318 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 BEX1Q9HBH7 125 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 HRASLSQ9HDD0 168 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 NKIRAS2Q9NYR9 191 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 MGAT4CQ9UBM8 478 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 CA5BQ9Y2D0 317 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 KCNE3Q9Y6H6 103 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 PRKACAP17612 351 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 CAMK1Q14012 370 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 GLDNQ6ZMI3 551 aaPredicted RBP16.35■□□□□ 0.21
RAB40C-205ENST00000539661 ADIPOR2Q86V24 386 aa16.35■□□□□ 0.21
RAB40C-205ENST00000539661 NAXDQ8IW45 347 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms