RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 SLITRK4Q8IW52 837 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 SLC43A2Q8N370 569 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 ANKK1Q8NFD2 765 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 BRIX1Q8TDN6 353 aaKnown RBP9.96□□□□□ -0.82
SPIDR-222ENST00000524006 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 UFD1Q92890 307 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 SLC35B4Q969S0 331 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 CLIP3Q96DZ5 547 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 SAMD8Q96LT4 415 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 GAL3ST4Q96RP7 486 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 DUSP23Q9BVJ7 150 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 IFT27Q9BW83 186 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 DPH1Q9BZG8 443 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 PLA2G12AQ9BZM1 189 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 C6orf62Q9GZU0 229 aaPredicted RBP9.96□□□□□ -0.82
SPIDR-222ENST00000524006 SPRTNQ9H040 489 aaPredicted RBP9.96□□□□□ -0.82
SPIDR-222ENST00000524006 PARD6AQ9NPB6 346 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 NCDNQ9UBB6 729 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 SSR3Q9UNL2 185 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 SRPK3Q9UPE1 567 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 FRYQ5TBA9 3013 aa9.96□□□□□ -0.82
SPIDR-222ENST00000524006 MN1Q10571 1320 aaPredicted RBP9.96□□□□□ -0.82
SPIDR-222ENST00000524006 HEATR5AQ86XA9 2040 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 hCG_2014768A0A024R1R8 64 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CENPVL1A0A0U1RR11 272 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 KDM4EB2RXH2 506 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 M0R082 166 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 GTPBP1O00178 669 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 YKT6O15498 198 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 FOXD2O60548 495 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 PFDN1O60925 122 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CSO75390 466 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 PPM1BO75688 479 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 TP53P04637 393 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CTSBP07858 339 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CKMT1AP12532 417 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ZNF3P17036 446 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 PSMA1P25786 263 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 HTR2AP28223 471 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 NOS3P29474 1203 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 SLC6A6P31641 620 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OPRL1P41146 370 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 SLC15A1P46059 708 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 EMDP50402 254 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ATP12AP54707 1039 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 WNT4P56705 351 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 PRKCDQ05655 676 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 RUNX1T1Q06455 604 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 MLLT11Q13015 90 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 DSG2Q14126 1118 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 FGFBP1Q14512 234 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 RGS21Q2M5E4 152 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ZNF404Q494X3 552 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ARMC4Q5T2S8 1044 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ACSM5Q6NUN0 579 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ARHGAP11AQ6P4F7 1023 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 DGAT2L6Q6ZPD8 337 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 QSOX2Q6ZRP7 698 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CXXC5Q7LFL8 322 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 GRAMD2AQ8IUY3 354 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 TMEM151BQ8IW70 566 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 SLC35F3Q8IY50 421 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 KLHL36Q8N4N3 616 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ARHGEF39Q8N4T4 335 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 SLC15A4Q8N697 577 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 PROKR2Q8NFJ6 384 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OR52I1Q8NGK6 324 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OR8D4Q8NGM9 314 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OR14A16Q8NHC5 309 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 C16orf52Q8NHV5 167 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 DYNC2LI1Q8TCX1 351 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OIT3Q8WWZ8 545 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CNOT9Q92600 299 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 HOXB13Q92826 284 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 RPL3LQ92901 407 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CCDC74AQ96AQ1 378 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 BPIFA2Q96DR5 249 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 VSTM2LQ96N03 204 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 SLC46A1Q96NT5 459 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 DPYSL5Q9BPU6 564 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 RSPO3Q9BXY4 272 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OR8D2Q9GZM6 311 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 MMP27Q9H306 513 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 OR52D1Q9H346 318 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ZBTB20Q9HC78 741 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 ZNF304Q9HCX3 659 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CRNNQ9UBG3 495 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 STUB1Q9UNE7 303 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 GPR52Q9Y2T5 361 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 KNL1Q8NG31 2342 aa9.95□□□□□ -0.82
SPIDR-222ENST00000524006 CNOT1A5YKK6 2376 aaKnown RBP9.95□□□□□ -0.82
SPIDR-222ENST00000524006 RP1P56715 2156 aa9.94□□□□□ -0.82
SPIDR-222ENST00000524006 FER1L5A0AVI2 2057 aa9.94□□□□□ -0.82
SPIDR-222ENST00000524006 A0A1B0GWA3 101 aa9.94□□□□□ -0.82
SPIDR-222ENST00000524006 A0A1B0GX78 115 aa9.94□□□□□ -0.82
SPIDR-222ENST00000524006 ELOA3DA6NLF2 546 aaPredicted RBP9.94□□□□□ -0.82
SPIDR-222ENST00000524006 EFCAB7A8K855 629 aa9.94□□□□□ -0.82
SPIDR-222ENST00000524006 A8MUA0 341 aa9.94□□□□□ -0.82
SPIDR-222ENST00000524006 PRR23D1E9PI22 279 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms