RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 NAXDQ8IW45 347 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR52L1Q8NGH7 329 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 SGTBQ96EQ0 304 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 ART5Q96L15 291 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 ZFP3Q96NJ6 502 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 MCHR1Q99705 422 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 QRSL1Q9H0R6 528 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 OR52D1Q9H346 318 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 POLMQ9NP87 494 aaPredicted RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 IL20RAQ9UHF4 553 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 CA5BQ9Y2D0 317 aa16.51■□□□□ 0.23
NUP54-205ENST00000507257 PCDHGA9Q9Y5G4 932 aaKnown RBP16.51■□□□□ 0.23
NUP54-205ENST00000507257 MYOFQ9NZM1 2061 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 CDC42EP2O14613 210 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 FLRT2O43155 660 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 VEGFDO43915 354 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 IL5P05113 134 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
NUP54-205ENST00000507257 SLC3A1Q07837 685 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 CAMK1Q14012 370 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 KANSL1Q7Z3B3 1105 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 HSD17B13Q7Z5P4 300 aaPredicted RBP16.5■□□□□ 0.23
NUP54-205ENST00000507257 HMGN2P46Q86SG4 172 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 RNF113BQ8IZP6 322 aaKnown RBP16.5■□□□□ 0.23
NUP54-205ENST00000507257 OR52H1Q8NGJ2 320 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 THAP4Q8WY91 577 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 MRGPRX3Q96LB0 322 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 SARGQ9BW04 601 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 GSDMCQ9BYG8 508 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 HRASLSQ9HDD0 168 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 CMC2Q9NRP2 79 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 OR6C2Q9NZP2 312 aa16.5■□□□□ 0.23
NUP54-205ENST00000507257 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.5■□□□□ 0.23
NUP54-205ENST00000507257 OR2M5A3KFT3 312 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 UNC119BA6NIH7 251 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 SNRPGP15A8MWD9 76 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 GABARAPH6UMI1 98 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 L7N2F9 121 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 FRS3O43559 492 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 GALR3O60755 368 aaPredicted RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 GATBO75879 557 aaKnown RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 RPN2P04844 631 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 FGF2P09038 288 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 SBK2P0C263 348 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 CXCL2P19875 107 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 PRKAG1P54619 331 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 CEBPEQ15744 281 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 OLFML2AQ68BL7 652 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 GLDNQ6ZMI3 551 aaPredicted RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 SDR16C5Q8N3Y7 309 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 C17orf47Q8NEP4 570 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 TTLQ8NG68 377 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 OR10H4Q8NGA5 316 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 OR5AR1Q8NGP9 310 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 SCARB1Q8WTV0 552 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 TMEM255BQ8WV15 326 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 PHYHIPQ92561 330 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 KAT2AQ92830 837 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 PELOQ9BRX2 385 aaKnown RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 KLHL1Q9NR64 748 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 ST6GALNAC2Q9UJ37 374 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 KCNE3Q9Y6H6 103 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 MDC1Q14676 2089 aaKnown RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 FAM86C2PA6NEL3 165 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 HMSDA8MTL9 139 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 MCRIP1C9JLW8 97 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 OGG1O15527 345 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 SULT1B1O43704 296 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 PIP5K1CO60331 668 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 NTN1O95631 604 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 UCHL1P09936 223 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 ICAM2P13598 275 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 SNRPBP14678 240 aaKnown RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 GJA1P17302 382 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 NFYAP23511 347 aaPredicted RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 SSR2P43308 183 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 MRPS10P82664 201 aaKnown RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 ZNF85Q03923 595 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 DBPQ10586 325 aaPredicted RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 POU4F2Q12837 409 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 CRHR2Q13324 411 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 BTN1A1Q13410 526 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 GRIN2CQ14957 1233 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 HEPHL1Q6MZM0 1159 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 Q6ZTK2 550 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 TMEM25Q86YD3 366 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 AMER3Q8N944 861 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 MOSPD2Q8NHP6 518 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 KLK6Q92876 244 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 ELMOD3Q96FG2 381 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 C4orf36Q96KX1 117 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 TEAD3Q99594 435 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 YIPF4Q9BSR8 244 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 MENTQ9BUN1 341 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 TAS2R5Q9NYW4 299 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 PFDN2Q9UHV9 154 aa16.49■□□□□ 0.23
NUP54-205ENST00000507257 ZNF223Q9UK11 482 aaPredicted RBP16.49■□□□□ 0.23
NUP54-205ENST00000507257 LRRK1Q38SD2 2015 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms