RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 C7orf26Q96N11 449 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 ZBTB18Q99592 522 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 RBM24Q9BX46 236 aaKnown RBP11.59□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF350Q9GZX5 532 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 PIGMQ9H3S5 423 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 RNF122Q9H9V4 155 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 SLCO1B3Q9NPD5 702 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 GALNT8Q9NY28 637 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 STOML1Q9UBI4 398 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 PACSIN3Q9UKS6 424 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 ZNF175Q9Y473 711 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
HDAC1-209ENST00000484305 A0A0J9YW62 118 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SERINC4A6NH21 518 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ENO4A6NNW6 628 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 TNFSF11O14788 317 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ADAMDEC1O15204 470 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 UBDO15205 165 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ZNF264O43296 627 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 CTAG2O75638 210 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 AGR2O95994 175 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 IL6P05231 212 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 UBL4AP11441 157 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SHC1P29353 583 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 EIF1P41567 113 aaKnown RBP11.58□□□□□ -0.56
HDAC1-209ENST00000484305 KIR2DL2P43627 348 aaPredicted RBP11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SLC6A8P48029 635 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 KHKP50053 298 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SUMO3P55854 103 aaPredicted RBP11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SIRPAP78324 504 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SKP2Q13309 424 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 MAPK14Q16539 360 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 GSTA3Q16772 222 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 AP1ARQ63HQ0 302 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 TYW3Q6IPR3 259 aaKnown RBP11.58□□□□□ -0.56
HDAC1-209ENST00000484305 PPP4R4Q6NUP7 873 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 FRRS1Q6ZNA5 592 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ZNF621Q6ZSS3 439 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 BTLAQ7Z6A9 289 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 HMGN2P46Q86SG4 172 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 KIF18BQ86Y91 864 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 LILRA2Q8N149 483 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 TRIML2Q8N7C3 387 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 OR9I1Q8NGQ6 314 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 LINC01560Q8TB33 94 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 LRRC8CQ8TDW0 803 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ROPN1LQ96C74 230 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ZG16BQ96DA0 208 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ARSGQ96EG1 525 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SAP130Q9H0E3 1048 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
HDAC1-209ENST00000484305 SLC6A13Q9NSD5 602 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 ZIM2Q9NZV7 527 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 WDR45Q9Y484 360 aa11.58□□□□□ -0.56
HDAC1-209ENST00000484305 CCDC168Q8NDH2 2452 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 TUBAL3A6NHL2 446 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 A8MXE2 369 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 CXCL13O43927 109 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 KIAA0513O60268 411 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 EIF4E2O60573 245 aaKnown RBP11.57□□□□□ -0.56
HDAC1-209ENST00000484305 SMNDC1O75940 238 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDAC1-209ENST00000484305 CSTAP01040 98 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 CGAP01215 116 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 GUSBP08236 651 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 PRKCAP17252 672 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 ME2P23368 584 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 SFTPDP35247 375 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 CPA2P48052 419 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 CCR4P51679 360 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 EEF1A1P68104 462 aaKnown RBP11.57□□□□□ -0.56
HDAC1-209ENST00000484305 SORDQ00796 357 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 LRRC74AQ0VAA2 488 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 GUSBP1Q15486 140 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 COX20Q5RI15 118 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 EEF1A1P5Q5VTE0 462 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 TMCO5AQ8N6Q1 288 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 OR5W2Q8NH69 310 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 OR2V1Q8NHB1 315 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
HDAC1-209ENST00000484305 FAM222BQ8WU58 562 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 EBF4Q9BQW3 602 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 LAT2Q9GZY6 243 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 VIPAS39Q9H9C1 493 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 ARGLU1Q9NWB6 273 aaPredicted RBP11.57□□□□□ -0.56
HDAC1-209ENST00000484305 GPC6Q9Y625 555 aaPredicted RBP11.57□□□□□ -0.56
HDAC1-209ENST00000484305 OTOGQ6ZRI0 2925 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 AKAP6Q13023 2319 aa11.57□□□□□ -0.56
HDAC1-209ENST00000484305 FAM221AA4D161 298 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 HMGB1P1B2RPK0 211 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 RFXANKO14593 260 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 MSTNO14793 375 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 DNAJA2O60884 412 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 BCAS1O75363 584 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 CYP7B1O75881 506 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 TGDSO95455 350 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 H6PDO95479 791 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 NTN1O95631 604 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 UBTFL6P0CB48 400 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 FCGR2AP12318 317 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms