RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 FCMRO60667 390 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 SOX30O94993 753 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 C1QCP02747 245 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 PRKCAP17252 672 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 ATP6V1C1P21283 382 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 BGNP21810 368 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 ADH6P28332 368 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 SFTPDP35247 375 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 EIF1P41567 113 aaKnown RBP10.68□□□□□ -0.7
PTPRF-211ENST00000467464 PLAURQ03405 335 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 SKP2Q13309 424 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 ZNF141Q15928 474 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 SPDYE7PQ495Y7 208 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 PDZK1Q5T2W1 519 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 ANKRD34AQ69YU3 496 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 HBMQ6B0K9 141 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 HEPHL1Q6MZM0 1159 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 C6orf120Q7Z4R8 191 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 IGFBPL1Q8WX77 278 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 TESCQ96BS2 214 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 ARSGQ96EG1 525 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 PIK3IP1Q96FE7 263 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 POM121Q96HA1 1249 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 PRPF18Q99633 342 aaKnown RBP10.68□□□□□ -0.7
PTPRF-211ENST00000467464 NMUR2Q9GZQ4 415 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 ZNF350Q9GZX5 532 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 GSX1Q9H4S2 264 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-211ENST00000467464 BEX4Q9NWD9 120 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-211ENST00000467464 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-211ENST00000467464 EMC9Q9Y3B6 208 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 DTNAQ9Y4J8 743 aa10.68□□□□□ -0.7
PTPRF-211ENST00000467464 RNF103-CHMP3A0A140T963 221 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 PRAMEF27A3QJZ7 478 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 CFLARO15519 480 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 KLF4O43474 513 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 DIAPH2O60879 1101 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 BCAS1O75363 584 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-211ENST00000467464 SYNGR4O95473 234 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 TUBBP07437 444 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 MYZAPP0CAP1 466 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 MATN1P21941 496 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 ME2P23368 584 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 SOAT1P35610 550 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 KCNJ5P48544 419 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 SLC1A6P48664 564 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 CASP8Q14790 479 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 MAPK14Q16539 360 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 EXOC3L2Q2M3D2 409 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 PGS1Q32NB8 556 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 PPP4R4Q6NUP7 873 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 LRRC34Q8IZ02 419 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 FAM71CQ8NEG0 241 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 OR5W2Q8NH69 310 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 PPP1R14CQ8TAE6 165 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 ABHD3Q8WU67 409 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 ROBO4Q8WZ75 1007 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 ZBTB9Q96C00 473 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 SLC35G5Q96KT7 338 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 TEX37Q96LM6 180 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 PIP5K1AQ99755 562 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 PRRG4Q9BZD6 226 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 KLHL4Q9C0H6 718 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 MEAF6Q9HAF1 191 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 ZNF226Q9NYT6 803 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 ING1Q9UK53 422 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-211ENST00000467464 GPC6Q9Y625 555 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-211ENST00000467464 MED12LQ86YW9 2145 aa10.67□□□□□ -0.7
PTPRF-211ENST00000467464 SERINC4A6NH21 518 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 SDHDO14521 159 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 ZNF264O43296 627 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 KIAA0513O60268 411 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 EIF4E2O60573 245 aaKnown RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 GCM2O75603 506 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 UGT2B17O75795 530 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 H6PDO95479 791 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 AK1P00568 194 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 PLGP00747 810 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 GUSBP08236 651 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 ALDOCP09972 364 aaKnown RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 UBL4AP11441 157 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 FOSL1P15407 271 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 HOXB4P17483 251 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 PSMB1P20618 241 aaKnown RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 RPL14P50914 215 aaKnown RBP10.66□□□□□ -0.7
PTPRF-211ENST00000467464 CASP9P55211 416 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 CARD18P57730 90 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 PPP2R2AP63151 447 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 QPRTQ15274 297 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 ACKR1Q16570 336 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 ARHGAP11BQ3KRB8 267 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 KRTAP21-3Q3LHN1 58 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 SPANXN4Q5MJ08 99 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 PDSS1Q5T2R2 415 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 SAXO2Q658L1 398 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 OGFOD2Q6N063 350 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 BHLHB9Q6PI77 547 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 TFAP2EQ6VUC0 442 aa10.66□□□□□ -0.7
PTPRF-211ENST00000467464 NUFIP2Q7Z417 695 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms