RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PIGQQ9BRB3 760 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SFXN3Q9BWM7 321 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 PINK1Q9BXM7 581 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 KLHL4Q9C0H6 718 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 TSPYL1Q9H0U9 437 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GLIPR2Q9H4G4 154 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GSTO2Q9H4Y5 243 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GCM1Q9NP62 436 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 DLL4Q9NR61 685 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 GIMAP4Q9NUV9 329 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FBXO34Q9NWN3 711 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 KLHL28Q9NXS3 571 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 TAS2R9Q9NYW1 312 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 SENP1Q9P0U3 644 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 BAIAP2L1Q9UHR4 511 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 EMCNQ9ULC0 261 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 MRPS18CQ9Y3D5 142 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 FIS1Q9Y3D6 152 aa4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 YLPM1P49750 1951 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-208ENST00000455546 RAI1Q7Z5J4 1906 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SLC22A20A6NK97 555 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SMIM23A6NLE4 172 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 DEFB108AA8MXU0 73 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CTIFO43310 598 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PLOD3O60568 738 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SEC22BO75396 215 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CRCPO75575 148 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 AQP8O94778 261 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SNUPNO95149 360 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 UTS2O95399 124 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 NTN1O95631 604 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CGAP01215 116 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SHBGP04278 402 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 ENO1P06733 434 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 GSTA1P08263 222 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 INHBBP09529 407 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 MYL2P10916 166 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PEPDP12955 493 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 ENPP1P22413 925 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SLC6A8P48029 635 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 KCNJ5P48544 419 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PRKAG1P54619 331 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 DIO3P55073 304 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PKNOX1P55347 436 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 LGALS4P56470 323 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 DSCR4P56555 118 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SORDQ00796 357 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 LTBQ06643 244 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 HSPB3Q12988 150 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 LCP2Q13094 533 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 EFR3AQ14156 821 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 TRIM25Q14258 630 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 KIAA0040Q15053 153 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PON3Q15166 354 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SGCBQ16585 318 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 DECR1Q16698 335 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 IMPG1Q17R60 797 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 EXOC3L2Q2M3D2 409 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 GRAMD1BQ3KR37 738 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 GLE1Q53GS7 698 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF385BQ569K4 471 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SPIN4Q56A73 249 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 NOXRED1Q6NXP6 359 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 ZYG11AQ6WRX3 759 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 Q6ZSR9 355 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SH2D5Q6ZV89 423 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 TRMT10CQ7L0Y3 403 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CAMKMTQ7Z624 323 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CEP112Q8N8E3 955 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 FADS6Q8N9I5 356 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 GATSQ8NAP1 163 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 MNS1Q8NEH6 495 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 OR2T11Q8NH01 316 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 OR4C3Q8NH37 302 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CLHC1Q8NHS4 586 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 FBXO30Q8TB52 745 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 FNDC9Q8TBE3 224 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 RNF138Q8WVD3 245 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 MBD6Q96DN6 1003 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 ELP4Q96EB1 424 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PIK3IP1Q96FE7 263 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 OTUB1Q96FW1 271 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 C16orf58Q96GQ5 468 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 AMDHD1Q96NU7 426 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 TXLNGYQ9BZA5 131 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PIGMQ9H3S5 423 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 UBTD1Q9HAC8 227 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 EQTNQ9NQ60 294 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 MIEF1Q9NQG6 463 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SDHAF3Q9NRP4 125 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 SH3BP4Q9P0V3 963 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 NDRG3Q9UGV2 375 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 DCDC2Q9UHG0 476 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 PACSIN3Q9UKS6 424 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 CLEC4AQ9UMR7 237 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 C19orf53Q9UNZ5 99 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 EIF3LQ9Y262 564 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 VDAC3Q9Y277 283 aa4.21□□□□□ -1.74
GTF3C3-208ENST00000455546 ABCA1O95477 2261 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms