RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 NPRL3Q12980 569 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 KCNAB2Q13303 367 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TOP3AQ13472 1001 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 KEAP1Q14145 624 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 GANABQ14697 944 aaKnown RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SF3A2Q15428 464 aaKnown RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF141Q15928 474 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZIK1Q3SY52 487 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 KCTD21Q4G0X4 260 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 FLYWCH1Q4VC44 716 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 CT45A2Q5DJT8 189 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 FGD3Q5JSP0 725 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 PRAMEF17Q5VTA0 474 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMEM154Q6P9G4 183 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF613Q6PF04 617 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 CD300LDQ6UXZ3 194 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 HSDL2Q6YN16 418 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF836Q6ZNA1 936 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 COX15Q7KZN9 410 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 RRM2BQ7LG56 351 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF550Q7Z398 422 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 WDR53Q7Z5U6 358 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ANKRD37Q7Z713 158 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 VRK2Q86Y07 508 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 GRAMD2AQ8IUY3 354 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 RNF113BQ8IZP6 322 aaKnown RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OFCC1Q8IZS5 231 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 HS3ST5Q8IZT8 346 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC34A3Q8N130 599 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 PARP8Q8N3A8 854 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC5A8Q8N695 610 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 BCORP1Q8N888 145 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SUMF1Q8NBK3 374 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC38A9Q8NBW4 561 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SIMC1Q8NDZ2 872 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 B3GNT7Q8NFL0 401 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR5L2Q8NGL0 311 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR6T1Q8NGN1 323 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR8K3Q8NH51 312 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR52J3Q8NH60 311 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 VANGL1Q8TAA9 524 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC2A12Q8TD20 617 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF721Q8TF20 911 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 PIK3R3Q92569 461 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 HDAC2Q92769 488 aaKnown RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ATOH1Q92858 354 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 MR1Q95460 341 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TSLPQ969D9 159 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZG16BQ96DA0 208 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 RMND5BQ96G75 393 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 VMP1Q96GC9 406 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 LIN37Q96GY3 246 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 HS6ST2Q96MM7 605 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 MUS81Q96NY9 551 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TAAR9Q96RI9 348 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 MBOAT4Q96T53 435 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 LPAR4Q99677 370 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 CTRCQ99895 268 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 EDEM2Q9BV94 578 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 DDA1Q9BW61 102 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TEX12Q9BXU0 123 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 DGCR6LQ9BY27 220 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 GABARAPL3Q9BY60 117 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 B3GNT4Q9C0J1 378 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR8D2Q9GZM6 311 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ING2Q9H160 280 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZNF696Q9H7X3 374 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMEM27Q9HBJ8 222 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 KRCC1Q9NPI7 259 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC22A11Q9NSA0 550 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SEMA4GQ9NTN9 838 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 OCIAD1Q9NX40 245 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TUBA8Q9NY65 449 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 VNN3Q9NY84 501 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 UBAP1Q9NZ09 502 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 NDUFA13Q9P0J0 144 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 NCDNQ9UBB6 729 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 CTSFQ9UBX1 484 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 CGGBP1Q9UFW8 167 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TESQ9UGI8 421 aaKnown RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMEFF2Q9UIK5 374 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 BLOC1S6Q9UL45 172 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 A4GNTQ9UNA3 340 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC35A3Q9Y2D2 325 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 MSRB2Q9Y3D2 182 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 GMPPBQ9Y5P6 360 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 MAGED1Q9Y5V3 778 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 MUC6Q6W4X9 2439 aa3.66□□□□□ -1.82
HMGB1P37-201ENST00000439613 A0A087WXM4 84 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC187A0A096LP49 1063 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRBV4-1A0A0J9YWV2 114 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SH3PXD2BA1X283 911 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRAPPC13A5PLN9 417 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SERINC4A6NH21 518 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SAGE2PA6NJ88 616 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 C4orf47A7E2U8 309 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 J3KTA2 159 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 M0R3H8 397 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 GTPBP1O00178 669 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms