RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 C10orf142B7Z368 130 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 LMO7DNF2Z398 122 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 RTCAO00442 366 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARPC2O15144 300 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 YKT6O15498 198 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 DUX1O43812 170 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF432O94892 652 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 C6orf47O95873 294 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PDGFBP01127 241 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 IGKV3-20P01619 116 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 EIF2S1P05198 315 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PROS1P07225 676 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PVRP15151 417 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 EFNA1P20827 205 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATP6V1B2P21281 511 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 HTR1EP28566 365 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 C21orf33P30042 268 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 AVPR2P30518 371 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHI3L1P36222 383 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 VHLP40337 213 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TSFMP43897 325 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 HTR3AP46098 478 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CAPZBP47756 277 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 FASLGP48023 281 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 AMTP48728 403 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TRPC1P48995 793 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSNK1EP49674 416 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARFIP1P53367 373 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 RAB8AP61006 207 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TRA2BP62995 288 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SKP1P63208 163 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSTF1Q05048 431 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC34A1Q06495 639 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TRIP10Q15642 601 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TIGD6Q17RP2 521 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 GRAMD1BQ3KR37 738 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 GTDC1Q4AE62 458 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 C14orf28Q4W4Y0 310 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 LRIF1Q5T3J3 769 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PMS2CLQ68D20 193 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR4C11Q6IEV9 310 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM71E1Q6IPT2 247 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 LCN8Q6JVE9 175 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 NANOGP8Q6NSW7 305 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 C8orf82Q6P1X6 216 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ERICH5Q6P6B1 374 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SPSB3Q6PJ21 355 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 FIGLAQ6QHK4 219 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF621Q6ZSS3 439 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ABHD13Q7L211 337 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 C16orf82Q7Z2V1 217 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CAMKMTQ7Z624 323 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 RABEPKQ7Z6M1 372 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SERPINA11Q86U17 422 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PAQR7Q86WK9 346 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TICAM1Q8IUC6 712 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 AQP12AQ8IXF9 295 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 RIMKLAQ8IXN7 391 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 KIAA2013Q8IYS2 634 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 MICU2Q8IYU8 434 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLECL1Q8IZS7 167 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARL14Q8N4G2 192 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 NATD1Q8N6N6 113 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SCAIQ8N9R8 606 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CAMKVQ8NCB2 501 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CATSPER1Q8NEC5 780 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR2L5Q8NG80 312 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR8J2Q8NGG1 315 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR8K5Q8NH50 307 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR10A6Q8NH74 314 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PNPT1Q8TCS8 783 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 FIG4Q92562 907 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 GTF2H4Q92759 462 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATOH1Q92858 354 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 EXOSC8Q96B26 276 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PPWD1Q96BP3 646 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 MS4A6EQ96DS6 147 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC35G5Q96KT7 338 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CCDC115Q96NT0 180 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TEFMQ96QE5 360 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR2A14Q96R47 310 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC35A5Q9BS91 424 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 INPP5KQ9BT40 448 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 TBCDQ9BTW9 1192 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PAIP1Q9H074 479 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SYNDIG1Q9H7V2 258 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 NANOGQ9H9S0 305 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SOHLH2Q9NX45 425 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 LYARQ9NX58 379 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CMTM6Q9NX76 183 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 VAPAQ9P0L0 249 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 C6orf203Q9P0P8 240 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 MDFICQ9P1T7 246 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ACTR3BQ9P1U1 418 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 STX18Q9P2W9 335 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATP6V1HQ9UI12 483 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 PHF11Q9UIL8 331 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 BTNL2Q9UIR0 455 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 ANAPC2Q9UJX6 822 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 POMT2Q9UKY4 750 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms