RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ZNF350Q9GZX5 532 aa16.66■□□□□ 0.26
PHF1-201ENST00000374512 MED28Q9H204 178 aa16.66■□□□□ 0.26
PHF1-201ENST00000374512 RANBP3Q9H6Z4 567 aaPredicted RBP16.66■□□□□ 0.26
PHF1-201ENST00000374512 EMC7Q9NPA0 242 aa16.66■□□□□ 0.26
PHF1-201ENST00000374512 SPHK1Q9NYA1 384 aa16.66■□□□□ 0.26
PHF1-201ENST00000374512 HAO2Q9NYQ3 351 aa16.66■□□□□ 0.26
PHF1-201ENST00000374512 RASD1Q9Y272 281 aa16.66■□□□□ 0.26
PHF1-201ENST00000374512 EIF4EP06730 217 aaKnown RBP16.65■□□□□ 0.26
PHF1-201ENST00000374512 PEPDP12955 493 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 SHC1P29353 583 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 TLX1P31314 330 aaPredicted RBP16.65■□□□□ 0.26
PHF1-201ENST00000374512 EVI2BP34910 448 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 FXYD6P3P58550 94 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 ARPC4P59998 168 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 ACTC1P68032 377 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 ACTA1P68133 377 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 CCDC85BQ15834 202 aaPredicted RBP16.65■□□□□ 0.26
PHF1-201ENST00000374512 ZNF776Q68DI1 518 aaPredicted RBP16.65■□□□□ 0.26
PHF1-201ENST00000374512 USP53Q70EK8 1073 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 OR10H4Q8NGA5 316 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 ABHD4Q8TB40 342 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 SCMH1Q96GD3 660 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 DPAGT1Q9H3H5 408 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 SLC35A3Q9Y2D2 325 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 NUBP2Q9Y5Y2 271 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 A0A0A6YYJ9 748 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 STX11O75558 287 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 RFPL3O75679 317 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 PAHP00439 452 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 NID1P14543 1247 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 P2RX3P56373 397 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 PITPNAQ00169 270 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 FOXK2Q01167 660 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 POU4F2Q12837 409 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 DUSP5Q16690 384 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 C9orf50Q5SZB4 431 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 CDH24Q86UP0 819 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 SLC44A3Q8N4M1 653 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 SERINC2Q96SA4 455 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 SLC17A9Q9BYT1 436 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 C14orf105Q9NVL8 296 aa16.65■□□□□ 0.26
PHF1-201ENST00000374512 TBC1D3EA0A087X179 549 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 CHP2O43745 196 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 SOX30O94993 753 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 SERPINA3P01011 423 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 IFI30P13284 250 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 MAKP20794 623 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 STOMP27105 288 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 NDUFS1P28331 727 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 RAG2P55895 527 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 SUZ12Q15022 739 aaKnown RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 OR1Q1Q15612 314 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 NTRK2Q16620 822 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 EXOSC6Q5RKV6 272 aaKnown RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 ZCCHC12Q6PEW1 402 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 ARL9Q6T311 187 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 BAIAP2L2Q6UXY1 529 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 VN1R4Q7Z5H5 301 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 CEACAM19Q7Z692 300 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 C9orf62Q8N4C0 152 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 PTP4A1Q93096 173 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 MED30Q96HR3 178 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 C7orf50Q9BRJ6 194 aaKnown RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 C1QTNF7Q9BXJ2 289 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 MFRPQ9BY79 579 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 LMAN2LQ9H0V9 348 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 C6orf106Q9H6K1 298 aaPredicted RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 ZNF275Q9NSD4 429 aaPredicted RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 CLDND1Q9NY35 253 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 B3GNT2Q9NY97 397 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 KCMF1Q9P0J7 381 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 RABL2AQ9UBK7 228 aaPredicted RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 RABL2BQ9UNT1 228 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 C19orf53Q9UNZ5 99 aaPredicted RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 TRAV1-2A0A0B4J238 106 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 A0A1W2PQU0 124 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 RIIAD1A6NNX1 92 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 DVL2O14641 736 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 AKR7A2O43488 359 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 LYPD3O95274 346 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 AK1P00568 194 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 SBK2P0C263 348 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 SLC35G6P0C7Q6 338 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 LAMP2P13473 410 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 BMP8BP34820 402 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 IGFALSP35858 605 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 OR3A3P47888 321 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 NRG3P56975 720 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 CD276Q5ZPR3 534 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 ASB18Q6ZVZ8 466 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 AMIGO1Q86WK6 493 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 OR14C36Q8NHC7 312 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 TRMT10AQ8TBZ6 339 aaKnown RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 COL26A1Q96A83 441 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 SLC22A18Q96BI1 424 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 ART5Q96L15 291 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 OR2M2Q96R28 347 aa16.64■□□□□ 0.25
PHF1-201ENST00000374512 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
PHF1-201ENST00000374512 PLA2G2FQ9BZM2 168 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms