RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ACOT8O14734 319 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 ARPC2O15144 300 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 TPST1O60507 370 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 ADAM11O75078 769 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 FESP07332 822 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 UBTFL6P0CB48 400 aaPredicted RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 TCN1P20061 433 aaPredicted RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 MAGEA5P43359 124 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 TDGF1P3P51864 188 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 SELENOWP63302 87 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 PLGLB1Q02325 96 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 EPS8Q12929 822 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 NRF1Q16656 503 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 LRRC23Q53EV4 343 aaPredicted RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 SOWAHCQ53LP3 525 aaPredicted RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 CYBRD1Q53TN4 286 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 CMPK2Q5EBM0 449 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 SLC25A53Q5H9E4 307 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 MTX3Q5HYI7 312 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 OR5M10Q6IEU7 315 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 ZNF550Q7Z398 422 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 COMTD1Q86VU5 262 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 ULK2Q8IYT8 1036 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 GPR119Q8TDV5 335 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 FAR1Q8WVX9 515 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 FIG4Q92562 907 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 NR4A3Q92570 626 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 POP5Q969H6 163 aaKnown RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 SNRNP40Q96DI7 357 aaKnown RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 CLPTM1LQ96KA5 538 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 ARHGDIGQ99819 225 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 DCAF13Q9NV06 445 aaKnown RBP12.82□□□□□ -0.36
VPS25-201ENST00000253794 RLIMQ9NVW2 624 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 KLHL28Q9NXS3 571 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 MED11Q9P086 117 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
VPS25-201ENST00000253794 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 CFAP73A6NFT4 308 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 TFECO14948 347 aaPredicted RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 SUV39H1O43463 412 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ZIC3O60481 467 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 HCN1O60741 890 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 FMO6PO60774 539 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 GMNNO75496 209 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 PDE5AO76074 875 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 NTN1O95631 604 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 OPN1SWP03999 348 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 LINGO3P0C6S8 592 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 NCK1P16333 377 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ZNF17P17021 662 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 PGCP20142 388 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 DPP4P27487 766 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 RFC3P40938 356 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ACAA2P42765 397 aaKnown RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 RNF144AP50876 292 aaPredicted RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 ZNF136P52737 540 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 MS4A2Q01362 244 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ALDH6A1Q02252 535 aaKnown RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 NFATC3Q12968 1075 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 CBFBQ13951 182 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 CISD2Q8N5K1 135 aaKnown RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 SMYD1Q8NB12 490 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 SLC26A7Q8TE54 656 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 LZICQ8WZA0 190 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ST8SIA1Q92185 356 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 MCUR1Q96AQ8 359 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ZBTB8AQ96BR9 441 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 JSRP1Q96MG2 331 aaPredicted RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 KLHDC3Q9BQ90 382 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 PCDHAC1Q9H158 963 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 AGPAT4Q9NRZ5 378 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 MED17Q9NVC6 651 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 ADPRHL2Q9NX46 363 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 RPS6KA6Q9UK32 745 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 SAMD4AQ9UPU9 718 aaKnown RBP12.81□□□□□ -0.36
VPS25-201ENST00000253794 NINQ8N4C6 2090 aa12.81□□□□□ -0.36
VPS25-201ENST00000253794 FAM166BA8MTA8 275 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 SUSD5O60279 629 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 SERPINA1P01009 418 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 UQCRBP14927 111 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 PSMA4P25789 261 aaKnown RBP12.8□□□□□ -0.36
VPS25-201ENST00000253794 MST1P26927 711 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 GDF1P27539 372 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 ADH6P28332 368 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 MSX2P35548 267 aaPredicted RBP12.8□□□□□ -0.36
VPS25-201ENST00000253794 B3GALT5-AS1P59052 145 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 SLC10A1Q14973 349 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 PLPPR5Q32ZL2 321 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 KRTCAP3Q53RY4 240 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 NHSL2Q5HYW2 709 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 GTPBP8Q8N3Z3 284 aaPredicted RBP12.8□□□□□ -0.36
VPS25-201ENST00000253794 LSMEM1Q8N8F7 131 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 FAM83FQ8NEG4 500 aaPredicted RBP12.8□□□□□ -0.36
VPS25-201ENST00000253794 FAM162AQ96A26 154 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 NSMCE2Q96MF7 247 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 GPR137Q96N19 417 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms