RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 WASHC5Q12768 1159 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 ZNF630Q2M218 657 aaPredicted RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 TMEM52BQ4KMG9 183 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 TFDP3Q5H9I0 405 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 ASPHD2Q6ICH7 369 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 WDR74Q6RFH5 385 aaPredicted RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 TMEM252Q8N6L7 170 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 DNAJA4Q8WW22 397 aaPredicted RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 FCGR1BQ92637 280 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 C14orf79Q96F83 325 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 MCHR1Q99705 422 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 ROPN1Q9HAT0 212 aaPredicted RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 MMP26Q9NRE1 261 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 PAK1IP1Q9NWT1 392 aaPredicted RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 UBQLN1Q9UMX0 589 aaKnown RBP3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 SCML2Q9UQR0 700 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 NUDCQ9Y266 331 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 AP4B1Q9Y6B7 739 aa3.1□□□□□ -1.91
SCAMP1-205ENST00000614488 ZNF705EA8MWA4 302 aaPredicted RBP3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 K7N7A8 449 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 ZNF264O43296 627 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 AKR7A3O95154 331 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 MT-ATP6P00846 226 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 HBQ1P09105 142 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 HTR1EP28566 365 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 AQP1P29972 269 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 HPDP32754 393 aaPredicted RBP3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 ST3GAL3Q11203 375 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 CYB5R2Q6BCY4 276 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 ANKRD37Q7Z713 158 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 ELMOD2Q8IZ81 293 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 CERS5Q8N5B7 392 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 SLC5A11Q8WWX8 675 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 OR1E3Q8WZA6 343 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 VSTM2LQ96N03 204 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 CITED1Q99966 193 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 TBCDQ9BTW9 1192 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 MRPL39Q9NYK5 338 aaKnown RBP3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 FOXJ3Q9UPW0 622 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 KNSTRNQ9Y448 316 aa3.09□□□□□ -1.91
SCAMP1-205ENST00000614488 CUX2O14529 1486 aa3.09□□□□□ -1.92
SCAMP1-205ENST00000614488 IGLV3-16A0A075B6K0 115 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 PSMB11A5LHX3 300 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 MAGEB4O15481 346 aaPredicted RBP3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 RRASP10301 218 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 SERPINA2P20848 420 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 NTHL1P78549 312 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 LRRC63Q05C16 580 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 EBI3Q14213 229 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 LANCL3Q6ZV70 420 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 BCORP1Q8N888 145 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 C20orf203Q8NBC4 194 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 SUMF2Q8NBJ7 301 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 OR5AU1Q8NGC0 362 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 NEIL3Q8TAT5 605 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 GIPC3Q8TF64 312 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 MYDGFQ969H8 173 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 IL22RA2Q969J5 263 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 SPXQ9BT56 116 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 CHRDL1Q9BU40 450 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 SRXN1Q9BYN0 137 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 NARFLQ9H6Q4 476 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 SPASTQ9UBP0 616 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 ATP6V1HQ9UI12 483 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 THSD7BQ9C0I4 1608 aa3.08□□□□□ -1.92
SCAMP1-205ENST00000614488 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 FAM230AA0A1W2PPH8 454 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 OR6C65A6NJZ3 312 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 CLUP10909 449 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 TOP1P11387 765 aaKnown RBP3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 PPOXP50336 477 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 STARD6P59095 220 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 RGS1Q08116 209 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 PDK1Q15118 436 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 SYPL1Q16563 259 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 NDUFA9Q16795 377 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 ARMCX2Q7L311 632 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 BLOC1S5Q8TDH9 187 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 MBOAT4Q96T53 435 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 ARHGDIGQ99819 225 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 RNF126Q9BV68 326 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 NXF3Q9H4D5 531 aaKnown RBP3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 WRAP73Q9P2S5 460 aaPredicted RBP3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 ASTN1O14525 1302 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 ABCC4O15439 1325 aa3.07□□□□□ -1.92
SCAMP1-205ENST00000614488 FAM74A7A6NL05 159 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 PP2D1A8MPX8 630 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 DUX1O43812 170 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 NPIPB7O75200 414 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 TOM1L1O75674 476 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 IGHV4-34P06331 123 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 ALOX5P09917 674 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 ETS1P14921 441 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 CYLC1P35663 651 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 CTRLP40313 264 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 ATXN3P54252 364 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 APOC4P55056 127 aa3.06□□□□□ -1.92
SCAMP1-205ENST00000614488 ADPRMQ3LIE5 342 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms