RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PRAMEF27A3QJZ7 478 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF25A6NGN4 478 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF26H0Y7S4 382 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 CCSO14618 274 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 GEMIN2O14893 280 aaKnown RBP8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF4O60810 478 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF11O60813 436 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 SCELO95171 688 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 RAB5AP20339 215 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 ERVFRD-1P60508 538 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 SIM1P81133 766 aaPredicted RBP8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 ZXDBP98169 803 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF5Q5TYX0 476 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF9Q5VWM5 478 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRAMEF6Q5VXH4 476 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 MAMDC4Q6UXC1 1216 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 OR4F15Q8NGB8 312 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 OR52P1PQ8NH57 321 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 RASD2Q96D21 266 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 SHISA4Q96DD7 197 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 BRF2Q9HAW0 419 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 MED9Q9NWA0 146 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 DNMT3BQ9UBC3 853 aaKnown RBP8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF816-ZNF321PA0A0X1KG74 233 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 RNF212BA8MTL3 300 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 A8MXE2 369 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 J3QW42 95 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 PRRG1O14668 218 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 CTSHP09668 335 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 OR8G3PP0DMU2 310 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 ADIGQ0VDE8 80 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 BOP1Q14137 746 aaKnown RBP8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 C17orf64Q86WR6 236 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 CBARPQ8N350 705 aaPredicted RBP8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 OR51S1Q8NGJ8 323 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 TMED6Q8WW62 240 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 NKX3-1Q99801 234 aaPredicted RBP8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 C20orf85Q9H1P6 137 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 OR52A5Q9H2C5 316 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 SLAMF8Q9P0V8 285 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 LRFN1Q9P244 771 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 RCE1Q9Y256 329 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 KCNMB2Q9Y691 235 aa8.48□□□□□ -1.05
GTF2A1-203ENST00000553612 J3KR12 359 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 IFNA6P05013 189 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF20P17024 532 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 SLC6A2P23975 617 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 SELENOPP49908 381 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 AP1S1P61966 158 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PMS2P11Q13670 270 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 HAGHQ16775 308 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 SYPL2Q5VXT5 272 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 LAMTOR1Q6IAA8 161 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PRSS35Q8N3Z0 413 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PPP1R14AQ96A00 147 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PHYHIPLQ96FC7 376 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 OR5B12Q96R08 314 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 TSSK6Q9BXA6 273 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DUSP16Q9BY84 665 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 ABHD16BQ9H3Z7 469 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 NXF3Q9H4D5 531 aaKnown RBP8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DLL4Q9NR61 685 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PRMT7Q9NVM4 692 aaPredicted RBP8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 GRID2O43424 1007 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 CHRNB4P30926 498 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DCTP40126 519 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 ART1P52961 327 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PLBD1Q6P4A8 553 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DEFB106AQ8N104 65 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 NECAP1Q8NC96 275 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 OR1L6Q8NGR2 347 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 FCAMRQ8WWV6 532 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DNASE1L2Q92874 299 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 TMEM176AQ96HP8 235 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 SNX22Q96L94 193 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 AMBRA1Q9C0C7 1298 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DTX4Q9Y2E6 619 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 TIMM13Q9Y5L4 95 aaPredicted RBP8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 FAM227AF5H4B4 570 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 J3QLW9 94 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 EREGO14944 169 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 HRO43593 1189 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 USP2O75604 605 aaPredicted RBP8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 CLDN9O95484 217 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF19P17023 458 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 RGS4P49798 205 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 TUBB3Q13509 450 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 LYPLAL1Q5VWZ2 237 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 OR4A47Q6IF82 309 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 C6orf120Q7Z4R8 191 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 AMIGO3Q86WK7 504 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 C2orf73Q8N5S3 287 aaPredicted RBP8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 PYURFQ96I23 114 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 MRGPRX4Q96LA9 322 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 SORCS2Q96PQ0 1159 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 OR8B4Q96RC9 309 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 DUSP26Q9BV47 211 aa8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 ELL3Q9HB65 397 aaPredicted RBP8.47□□□□□ -1.05
GTF2A1-203ENST00000553612 EIF2B3Q9NR50 452 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms