RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MDFICQ9P1T7 246 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PROCRQ9UNN8 238 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 MEMO1Q9Y316 297 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PYGO1Q9Y3Y4 419 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PPIAL4AQ9Y536 164 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 CPQQ9Y646 472 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGHV4-30-2A0A087WSY4 118 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 F5H6K3 240 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 NTN3O00634 580 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 RNF13O43567 381 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 EFNA2O43921 213 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 UPK3AO75631 287 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 UGT2B17O75795 530 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 CA1P00915 261 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGHG3P01860 377 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 PABPC4LP0CB38 370 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 MCF2P10911 925 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 CASP14P31944 242 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 CDH5P33151 784 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCT6AP40227 531 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 GYG1P46976 350 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 POU3F4P49335 361 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 GSCP56915 257 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 KLRC3Q07444 240 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 TGM3Q08188 693 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 BST2Q10589 180 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF146Q15072 292 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 NDUFA9Q16795 377 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 MOGAT2Q3SYC2 334 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 LRRC66Q68CR7 880 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 GDPGP1Q6ZNW5 385 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 OTUD6AQ7L8S5 288 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 H2BFWTQ7Z2G1 175 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 PSTKQ8IV42 348 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC35F2Q8IXU6 374 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 CCDC148Q8NFR7 591 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF75CPQ92670 426 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 TSNARE1Q96NA8 513 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC38A2Q96QD8 506 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR5B2Q96R09 309 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 NIPSNAP3BQ9BS92 247 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 FGF22Q9HCT0 170 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 ELOVL2Q9NXB9 296 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 MLXQ9UH92 298 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 IKZF2Q9UKS7 526 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 KIAA1257Q9ULG3 409 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 MRPS28Q9Y2Q9 187 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 PLEKHG2Q9H7P9 1386 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATP10AO60312 1499 aa3.2□□□□□ -1.9
TRAPPC13-208ENST00000505553 GOLGA6L7A0A1B0GV03 622 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TRABD2BA6NFA1 517 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM25EA8MYX2 175 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 C9JVG2 144 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 K7EQG2 157 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RS1O15537 224 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CDH16O75309 829 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CTAG2O75638 210 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CRYGBP07316 175 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 METP08581 1390 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 H2AFZP0C0S5 128 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TNNI1P19237 187 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 UGT1A5P35504 534 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 DUSP3P51452 185 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TPMTP51580 245 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ARHGDIAP52565 204 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATP1B3P54709 279 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RND3P61587 244 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF33BQ06732 778 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FASTKD3Q14CZ7 662 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC15A2Q16348 729 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 CYP51A1Q16850 503 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 KLHL38Q2WGJ6 581 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC25A52Q3SY17 297 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TP53I3Q53FA7 332 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 XKR7Q5GH72 579 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM76BQ5HYJ3 339 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 LGSNQ5TDP6 509 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 SEL1L2Q5TEA6 688 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 MEDAGQ5VYS4 303 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM219BQ5XKK7 198 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RNASEKQ6P5S7 137 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMEM107Q6UX40 140 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMCO2Q7Z6W1 182 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RNF130Q86XS8 419 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ALLCQ8N6M5 410 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 C17orf47Q8NEP4 570 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR4C5Q8NGB2 326 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR52K1Q8NGK4 314 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 RFESDQ8TAC1 157 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM76AQ8TAV0 307 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM81AQ8TBF8 368 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 TSEN15Q8WW01 171 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 ST8SIA1Q92185 356 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 STARD8Q92502 1023 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 NTNG2Q96CW9 530 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 IFT74Q96LB3 600 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 C9orf85Q96MD7 179 aa3.19□□□□□ -1.9
TRAPPC13-208ENST00000505553 C11orf70Q9BRQ4 267 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms