RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CHFRQ96EP1 664 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 HCAR1Q9BXC0 346 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 RNF208Q9H0X6 261 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 LRRN3Q9H3W5 708 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 MAN2C1Q9NTJ4 1040 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 PLEKHM1Q9Y4G2 1056 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 PATJQ8NI35 1801 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 ACOD1A6NK06 481 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 B8ZZF3 427 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 STK25O00506 426 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 CDC42EP2O14613 210 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 FGF18O76093 207 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 SIX6O95475 246 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 AIFM1O95831 613 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 TFP02787 698 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 UCHL1P09936 223 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 TEAD1P28347 426 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 EPHA5P54756 1037 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 PER3P56645 1201 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
VPS52-218ENST00000482399 RGS1Q08116 209 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 MESP2Q0VG99 397 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 GALEQ14376 348 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 LINC00471Q8N535 108 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 COX18Q8N8Q8 333 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 C17orf47Q8NEP4 570 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 OR5M3Q8NGP4 307 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 CNRIP1Q96F85 164 aaPredicted RBP11.86□□□□□ -0.51
VPS52-218ENST00000482399 FZD3Q9NPG1 666 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 DSPPQ9NZW4 1301 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 TRBV2A0A0J9YWF9 115 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 A0A1W2PR48 441 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 PLATP00750 562 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 RHOP08100 348 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 NAT2P11245 290 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 CRMP1Q14194 572 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 GPNMBQ14956 572 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 GRK1Q15835 563 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 HBMQ6B0K9 141 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 DPPA4Q7L190 304 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 ABHD4Q8TB40 342 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 SETD7Q8WTS6 366 aaKnown RBP11.86□□□□□ -0.51
VPS52-218ENST00000482399 TNFAIP8L1Q8WVP5 186 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 KIAA1143Q96AT1 154 aaPredicted RBP11.86□□□□□ -0.51
VPS52-218ENST00000482399 DEC1Q9P2X7 70 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 FKBP7Q9Y680 259 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 NLRC5Q86WI3 1866 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 UNC119BA6NIH7 251 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 RAF1P04049 648 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ADH7P40394 386 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 PSMA6P60900 246 aaKnown RBP11.85□□□□□ -0.51
VPS52-218ENST00000482399 LGALS3BPQ08380 585 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ATXN7L3Q14CW9 347 aaPredicted RBP11.85□□□□□ -0.51
VPS52-218ENST00000482399 NDUFAF6Q330K2 333 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 PYHIN1Q6K0P9 492 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ZNF793Q6ZN11 406 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 TMEM91Q6ZNR0 172 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 GDF7Q7Z4P5 450 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 OAFQ86UD1 273 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 RANBP3LQ86VV4 465 aaPredicted RBP11.85□□□□□ -0.51
VPS52-218ENST00000482399 SLC39A11Q8N1S5 342 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 OR52E2Q8NGJ4 325 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 OR8S1Q8NH09 359 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ZNF514Q96K75 400 aaPredicted RBP11.85□□□□□ -0.51
VPS52-218ENST00000482399 FN3KQ9H479 309 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 FBXO9Q9UK97 447 aaPredicted RBP11.85□□□□□ -0.51
VPS52-218ENST00000482399 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 CDHR4A6H8M9 788 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ARRDC5A6NEK1 342 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 LGALS8O00214 317 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 APOC3P02656 99 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 CSN2P05814 226 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ENPP1P22413 925 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 AHCYP23526 432 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 SOX9P48436 509 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 SLC7A9P82251 487 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 DEFA5Q01523 94 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 DUSP2Q05923 314 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 MORN4Q8NDC4 146 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 OR56A1Q8NGH5 318 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ZSWIM3Q96MP5 696 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 OR14A2Q96R54 314 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ARL6Q9H0F7 186 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ENKD1Q9H0I2 346 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 B3GNT2Q9NY97 397 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 DPP7Q9UHL4 492 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 PHF11Q9UIL8 331 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 SF3B6Q9Y3B4 125 aaKnown RBP11.85□□□□□ -0.51
VPS52-218ENST00000482399 LOC100509620A0A075B734 347 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 A0A0G2JPF8 293 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 HNRNPCL3B7ZW38 293 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 SURF4O15260 269 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 EMC8O43402 210 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 FBXO45P0C2W1 286 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 HNRNPCL4P0DMR1 293 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ADRB3P13945 408 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 BMP8BP34820 402 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 C21orf58P58505 322 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 LRRC37A5PQ49AS3 106 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 OTPQ5XKR4 325 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms