RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GP6Q9HCN6 339 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 Q9N2J8 555 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GIMAP4Q9NUV9 329 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 MED17Q9NVC6 651 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 NMRK1Q9NWW6 199 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GRHL1Q9NZI5 618 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 NPAP1Q9NZP6 1156 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SENP1Q9P0U3 644 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 MCM8Q9UJA3 840 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 SNX6Q9UNH7 406 aa4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 C19orf53Q9UNZ5 99 aaPredicted RBP4.54□□□□□ -1.68
SNRNP40-204ENST00000474025 GNG14A0A1W2PPG7 69 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 GXYLT2A0PJZ3 443 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNF814B7Z6K7 855 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 E7EQL1 145 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CCDC188H7C350 402 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 H7C417 338 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MANBAO00462 879 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 LYZL6O75951 148 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SLITRK5O94991 958 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 OR4F21O95013 312 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 OXSR1O95747 527 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 JUNP05412 331 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PGRP06401 933 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 NGFRP08138 427 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 RBP1P09455 135 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PABPC4LP0CB38 370 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 COL6A2P12110 1019 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 HSD3B1P14060 373 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 TSPAN8P19075 237 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 COX5AP20674 150 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 DDCP20711 480 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 USF1P22415 310 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 EDNRAP25101 427 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 HSD3B2P26439 372 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ELK4P28324 431 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 TYK2P29597 1187 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 TIA1P31483 386 aaKnown RBP eCLIP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 TTKP33981 857 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SFTPDP35247 375 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MAP3K8P41279 467 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MAGEA4P43358 317 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MAGEA12P43365 314 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 OR3A2P47893 321 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 GZMKP49863 264 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SERPINB8P50452 374 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 NCBP2P52298 156 aaKnown RBP eCLIP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PSMD4P55036 377 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MANFP55145 182 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CDH13P55290 713 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CARD18P57730 90 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SLC18A2Q05940 514 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SPOCK1Q08629 439 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CALCOCO2Q13137 446 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SQLEQ14534 574 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PPA1Q15181 289 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 RNPS1Q15287 305 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ZNHIT3Q15649 155 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 STK11Q15831 433 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 GLE1Q53GS7 698 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SPIN4Q56A73 249 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ARSJQ5FYB0 599 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 FAM120AOSQ5T036 256 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PDSS1Q5T2R2 415 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CPTPQ5TA50 214 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 FAM166AQ6J272 317 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 GALNT18Q6P9A2 607 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 B3GLCTQ6Y288 498 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ZAR1Q86SH2 424 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 TRABD2AQ86V40 505 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 LILRA2Q8N149 483 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 OR2L13Q8N349 312 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MUC15Q8N387 334 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CEP112Q8N8E3 955 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CDYL2Q8N8U2 506 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 GATSQ8NAP1 163 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 OR4C3Q8NH37 302 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 POC1BQ8TC44 478 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ACTRT2Q8TDY3 377 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 FAM168AQ92567 244 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PIK3R3Q92569 461 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PROX1Q92786 737 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CPNE4Q96A23 557 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 APIPQ96GX9 242 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 SH3YL1Q96HL8 342 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 AMDHD1Q96NU7 426 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 DHRS9Q9BPW9 319 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 C1QTNF3Q9BXJ4 246 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ACPTQ9BZG2 426 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 PLA2G12AQ9BZM1 189 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 VPS11Q9H270 941 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 GLIPR2Q9H4G4 154 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 COQ10BQ9H8M1 238 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CHODLQ9H9P2 273 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 L2HGDHQ9H9P8 463 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 BCO1Q9HAY6 547 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 CBLN4Q9NTU7 201 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 DDX18Q9NVP1 670 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 NOP53Q9NZM5 478 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 RNF14Q9UBS8 474 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms